Detailed information of ENSTIFP00000001355.1 in Montipora efflorescens

Genomic Location: BLFP01000156.1:228700...423394
NR annotation: RMX56879.1, hypothetical protein pdam_00006298 [Pocillopora damicornis]
Species Montipora efflorescens · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0DSP1Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3
Q95209Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000638 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15902
all species →		Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF00057
all species →		Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172
all species →		RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR006581
all species →		DomainVPS10Interproscan
IPR050685
all species →		FamilyLow-density lipoprotein receptorInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036055
all species →		Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR031778
all species →		DomainSortilin, N-terminalInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270
all species →		LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSTIFP00000001355.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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