Gene detail

Detailed information of ENSTIFP00000001487.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029191025.1, DNA-directed RNA polymerase III subunit RPC8-like [Acropora millepora]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D2C6	DNA-directed RNA polymerase III subunit RPC8 OS=Mus musculus OX=10090 GN=Polr3h PE=1 SV=2
Q2T9X1	DNA-directed RNA polymerase III subunit RPC8 OS=Bos taurus OX=9913 GN=POLR3H PE=2 SV=1
Q9Y535	DNA-directed RNA polymerase III subunit RPC8 OS=Homo sapiens OX=9606 GN=POLR3H PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007205 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08292 all species →	RNA_pol_Rbc25	RNA polymerase III subunit Rpc25	Domain	Interproscan
PF03876 all species →	SHS2_Rpb7-N	SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR013238 all species →	Domain	RNA polymerase III, subunit Rpc25	Interproscan
IPR036898 all species →	Homologous_superfamily	RNA polymerase Rpb7-like, N-terminal domain superfamily	Interproscan
IPR005576 all species →	Domain	RNA polymerase Rpb7-like , N-terminal	Interproscan
IPR045113 all species →	Family	RNA polymerase subunit Rpb7-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12709 all species →	DNA-DIRECTED RNA POLYMERASE II, III	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0005666 all species →	Cellular Component	RNA polymerase III complex	Interproscan
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0006384 all species →	Biological Process	transcription initiation at RNA polymerase III promoter	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000001487.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.