Gene detail

Detailed information of ENSTIFP00000001868.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029198445.2, sterol regulatory element-binding protein cleavage-activating protein-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000002005

ATGAGTGCAGATGGAATCAATATGGAAAATGAAGGGAAAGATAAAGCTGATCGAGAGGGCATAAAGGAGAGTGACACCGGGGAAGACCTGATTTCTCGTTTGTGTTATGAgcatggatatttttgcgccaCTCACCCTAAAATTGTCATAATTTTTGCGCTCGTGGTTGTCTTCAGTTGCAGtGCCCCTTTGTTCTCTGTTCCACTGTTTGGCGGCTCAGCTGCAATAGAATGGATAACGCTAAGTTCTTCTGGAGTTTCTGTGGCAGATAGCAGAGCTAAAACACAGAGAATTCTACAGGGAAATGACAGCACCATTCCAAGATGGTTTGTAGGTGATCCACTGCTTTATATTCAGCAGTTTATTCTAATGGCACACATCAGTCCTTGGAGACCTCACTTACAAAATAACAAGGTCATAAAGGAGGCATTGAGGCCAGCATTCAACATCACAAAGTTTATCACAGATTTCCAGTTTGAAGATGGGGGCCATGCTGTGAAATTAAGTGATGTTTGCTTACAAGTAAGTTCTGGTTCAAGTGTTGCACATCTGTCTGGCTACATGATCAAAGATCAGAGATATCTCCCTTCTGAAGGATGCCTGTTGCTCTCCCCGGCTAACCTTTGGAGCAGGAGCATGGAAAggtTCAATGAAGACCCTTCAGTTCTTGATGATCTTTATTTAGACCGCAGCATTAAGCTGTCGTTTAATATTGCTCTCAGAGAGTACATTCTTGGCTTACCAATCAGACACACAGGAATTTACCCCAATTTACACAGTGATGGACCCAACCACATAATCCAGTATGCAGTAACACTTGTACTTTCCTCGCATGATGCAAGATACATGAATGAGCTTGGCAAACAGTTAAAAAGGGAGTTTCCTCAAGCCTCTCAAACTGCAGAACACAATGTTGTTGAAAGAGATAATGTTGTGCACATATACTACAAGGGTGAAAACAGAGAGTTCATCGAGCTGCTTCCCCTTTGTGTTACGTACTTTATAGTATTTCTATACTTGGCTTTTGCTGTTGCCAAGATAGAGATGGTTAAGAGCAAGTGGGGTTTGGCATTCAGCGCTGTCATCTCTGTAATTGCATCTCTTGTCATGGCATCAGGGTTGTGTTCCTTCTTTGGCCTTGTAACTACTCTAGACAGCAGTGAAATATTTCCATATCTGGTTATTGTGCTTGGTGTTGAAAACATCTTGGTGATAACAAAGTCTGTAGTGTCAACTCCAGTTGATCTTGAAGTCAAGGTCAGAGTTGCACAAGGACTCAGCAAGGAAGGCTGGTACATTCTAAAGAACCTGTGGGCTGAGATtgcactttgttcagctggatATTTCACTTATGTGCCAGCTGTTCAGgagttttgtttctttgccaTAATTTGTCTGCTGTcagacttctttcttcaaatggTGCTCTTTGTGACAGTTTTGTCCATCGATATCCGTAGAATGGAGCTATCCGATCTCCAACGGATTCAACAAACTGCAAGACAAAGGAGTGTTAGGGAGGGCACTATGCCAGCAGCTTATTCAAAGTTGGGTCAAAGTCCACCATCACCCGTGTCCAGTCCCCCTCATTCCCCTGAACCAGTGCAGTTCTTTGGTCTGCTTCCTCCACTACCCCCATCGTCACTGACCACTCAGAGAACTCCCCCCAGGGAGTGCCCGGTGATGCCAACGAAGCTTCCCAGAAGGCTCAATGTTGCCTACTTTTGGGCAAGAAACAGGATTGTGCAAAAGGCTTGTATGATCTGCTTTGTTCTCTATTTTGTGAGTATTCTTAGTCACCCCTTGTCTGAACCTGTTGGCACTCAGGAACAACGAAATTTAACTGAAAAACTCTATGATAACAATTTCGGTCTCGATAATGAGGTTGACGAAACTCCAGCAACCGAGAAAGTGGAAAGAACCACTTTCTTGTCAGAGGAGGAAATGAACAAAGAGGAGTTACGGAAGAGAAGGCCCGAATTTTCCCCGAAAGCTCCTTCGGTTGAGATTTGGAAAGGTCTTTATCAACGACACTGGCCTgaacttttaaattattataatatcaGCTTACTAGGGAGGTACGTGTCCGTTCTTCCACCGGTTCATCTTGGCATCAGTATTGATACAGACATCTTTGCCGTGGATTCCTCCCAAGACGTCGTCGCCTTCTCGTCTGCAAATGGCTCTATAAAACTCGAGCAGCCTTTGGGCAGCGAAGACGAGAGAGAGTCTACGGAGAACGATATACGGGATCCCAAGTATTTCCACAACGCCTTGACATGCGTCGTACTTGGTGTAGTCGTCATGATTATTCTCTTCTTTATCTGTaaatttttgaatgaccttcAGATCAACCCCAGGTTAGGGCGCGGCCGGAAAGGAAGAAGCTGCGGTCACCATAGACTGGTGGAAAGCGTTCCTATCAGTCTCAAGGGACATTCGCAGAATGTGGAGCATTTGAAATGCACGATGTCTTTAATAATCAGTGTCTGTCTGAGTGGACAGATTTTCTTCTGGGACATAGCTACCGGGCATCGCCTGAGAGTGATCAAAAGGGCGAGTCGTGAACAGTCGGAGGTTGCACTAAGAAGACAGAACTCTACAGTGAAGAAGCCAAAGCAAAGGACCTATAAAGAAACGGAAAGAGGTCAGACTGCACAGCGGTATACCGGAGGATTGTCTAGTCCCAGACCGATCTCGGATATGGAGCGGCCTCAGGTTTGCTGTGAAATTGAATCAGAAGCAGCCAATGGAGTGCAAACGTCTGAAGAAGACTACGAGGCGCTGAAGCATGAGAAAGAATCAAAGGGGAATCCAAAGTCCTCTGGATACGACTTCAGTAAATATGCCAACGGTGCGGACATCCCCCCGTGGTCTCCCACCTCCAGACGCTCCTTCACAAGTTCCTGGTCCAGTGCTGATGGAGACGATCCTGGGTTGTTATCCAGTTCAGAAGAGTCTGGTGATGAGCAGGCTTTTGTACAGACGAATAGTTTCCAAGACAACCTGCTAACGGGAGCCTCGGTTTGGTGTTTGGATTGTTGGGGGGATTTTCTCGTGGTTGGATGCAGCGACGGTACAATTGAGatcTGGAGTGTGTTGTCTGGTGCGCAGTTATACGTGTCACGTGACAGTCCTATCGGTGTTAGTAAACTTTGCTGTTTGACACACAGCCCTCAAATTGTGGTGGCTCGTTTGGATGGCACACTGGAGTTCTTAACCCTTGGGGTGCCCACACGATGGGCCCTTCAAGAAAACTCCCCTATAAAGCGGTCCTCGCCTAGAGTTACGAGAAAATCTGAAGCGCAAACATCTAGAATTTTCGATGCGTCCAACAGCGAAGCCTCTACAGCAGTCGGCGTCAAAGGGACCCGCGCGTGCACTTCAATAGATAGTCCGCAGTGTAGGGTGATTCACAAACTGCGGGCTCACCATCAACCCATAAGTGTGCTGGGTGTCATGGAAGGACGGGTCATCACTGGAAGTCACGACAGAACACTCAAGGTTTTTCGGACTGATGAATGCGTGTGTGTTTACACATTACACGGACATGCGGACAGTATCACCGCCCTTACCATAGATAAGACAAATAACCGTCAAGTAGTCAGCGGCGCTGCTAATGGAGGCGTGCGCGTCTGGGATGTCATAAGTGGCGAATGTCTACAGCATCTTCGAGGTCACGTGAAATCCGTGACTGCTGTAACATGCACAGCGGAGCACTTGCTGAGCGTAAGTTTGGAAAGCGTGCTTTGCATTTGGGACAGGTCACGTGGCGAGTGTTTGCATCGTCTAAAACAGTTCCCAGATCTGTGCTCCAACGTCGCCATGCTGTCGAAAACTCTGTTTATTACAGGAGGACAGGGACACATTTCTGTGTGGGATGTCCGCACTGGAAGACGCGTGAAAACTGTGTTGCTTGGTGATGATGACACGACAGTTTTTGTGCGTTACGTGAACGTGTGTGACAATAAAACGGTCGTGTGTGATTTTGGAAAGGAAGTCAAAATTGTGACTTTTCCTGCCGTCATGGACAAGGCAGAATGA

Transcript

ENSTIFT00000002005

TGGTAGCAAACGGATGAATGAGAGAATCATAGTGGTTGTGCATCAAAATCTGCGAGAATTCtgctcaaaattcaaaacatgaCCGAGGTCGGACCTGTATTTTCACATACCTCCGGCTGATAGGCCTCTCTACTCACATGGATGGGAACTCGATACCGGCTGAACAGCTGAAGAAAATGGCTGCAAAATTCGATTTTTTGATATAAATTGGAAAAGAAATCGCTCATTGATTCATTCGAACCAGTGGAAGGGCGTGGATCTGTTTTGGATGTGGATCAAAGCGGAGAGTTTCTGTCATTATGAGTGCAGATGGAATCAATATGGAAAATGAAGGGAAAGATAAAGCTGATCGAGAGGGCATAAAGGAGAGTGACACCGGGGAAGACCTGATTTCTCGTTTGTGTTATGAgcatggatatttttgcgccaCTCACCCTAAAATTGTCATAATTTTTGCGCTCGTGGTTGTCTTCAGTTGCAGtGCCCCTTTGTTCTCTGTTCCACTGTTTGGCGGCTCAGCTGCAATAGAATGGATAACGCTAAGTTCTTCTGGAGTTTCTGTGGCAGATAGCAGAGCTAAAACACAGAGAATTCTACAGGGAAATGACAGCACCATTCCAAGATGGTTTGTAGGTGATCCACTGCTTTATATTCAGCAGTTTATTCTAATGGCACACATCAGTCCTTGGAGACCTCACTTACAAAATAACAAGGTCATAAAGGAGGCATTGAGGCCAGCATTCAACATCACAAAGTTTATCACAGATTTCCAGTTTGAAGATGGGGGCCATGCTGTGAAATTAAGTGATGTTTGCTTACAAGTAAGTTCTGGTTCAAGTGTTGCACATCTGTCTGGCTACATGATCAAAGATCAGAGATATCTCCCTTCTGAAGGATGCCTGTTGCTCTCCCCGGCTAACCTTTGGAGCAGGAGCATGGAAAggtTCAATGAAGACCCTTCAGTTCTTGATGATCTTTATTTAGACCGCAGCATTAAGCTGTCGTTTAATATTGCTCTCAGAGAGTACATTCTTGGCTTACCAATCAGACACACAGGAATTTACCCCAATTTACACAGTGATGGACCCAACCACATAATCCAGTATGCAGTAACACTTGTACTTTCCTCGCATGATGCAAGATACATGAATGAGCTTGGCAAACAGTTAAAAAGGGAGTTTCCTCAAGCCTCTCAAACTGCAGAACACAATGTTGTTGAAAGAGATAATGTTGTGCACATATACTACAAGGGTGAAAACAGAGAGTTCATCGAGCTGCTTCCCCTTTGTGTTACGTACTTTATAGTATTTCTATACTTGGCTTTTGCTGTTGCCAAGATAGAGATGGTTAAGAGCAAGTGGGGTTTGGCATTCAGCGCTGTCATCTCTGTAATTGCATCTCTTGTCATGGCATCAGGGTTGTGTTCCTTCTTTGGCCTTGTAACTACTCTAGACAGCAGTGAAATATTTCCATATCTGGTTATTGTGCTTGGTGTTGAAAACATCTTGGTGATAACAAAGTCTGTAGTGTCAACTCCAGTTGATCTTGAAGTCAAGGTCAGAGTTGCACAAGGACTCAGCAAGGAAGGCTGGTACATTCTAAAGAACCTGTGGGCTGAGATtgcactttgttcagctggatATTTCACTTATGTGCCAGCTGTTCAGgagttttgtttctttgccaTAATTTGTCTGCTGTcagacttctttcttcaaatggTGCTCTTTGTGACAGTTTTGTCCATCGATATCCGTAGAATGGAGCTATCCGATCTCCAACGGATTCAACAAACTGCAAGACAAAGGAGTGTTAGGGAGGGCACTATGCCAGCAGCTTATTCAAAGTTGGGTCAAAGTCCACCATCACCCGTGTCCAGTCCCCCTCATTCCCCTGAACCAGTGCAGTTCTTTGGTCTGCTTCCTCCACTACCCCCATCGTCACTGACCACTCAGAGAACTCCCCCCAGGGAGTGCCCGGTGATGCCAACGAAGCTTCCCAGAAGGCTCAATGTTGCCTACTTTTGGGCAAGAAACAGGATTGTGCAAAAGGCTTGTATGATCTGCTTTGTTCTCTATTTTGTGAGTATTCTTAGTCACCCCTTGTCTGAACCTGTTGGCACTCAGGAACAACGAAATTTAACTGAAAAACTCTATGATAACAATTTCGGTCTCGATAATGAGGTTGACGAAACTCCAGCAACCGAGAAAGTGGAAAGAACCACTTTCTTGTCAGAGGAGGAAATGAACAAAGAGGAGTTACGGAAGAGAAGGCCCGAATTTTCCCCGAAAGCTCCTTCGGTTGAGATTTGGAAAGGTCTTTATCAACGACACTGGCCTgaacttttaaattattataatatcaGCTTACTAGGGAGGTACGTGTCCGTTCTTCCACCGGTTCATCTTGGCATCAGTATTGATACAGACATCTTTGCCGTGGATTCCTCCCAAGACGTCGTCGCCTTCTCGTCTGCAAATGGCTCTATAAAACTCGAGCAGCCTTTGGGCAGCGAAGACGAGAGAGAGTCTACGGAGAACGATATACGGGATCCCAAGTATTTCCACAACGCCTTGACATGCGTCGTACTTGGTGTAGTCGTCATGATTATTCTCTTCTTTATCTGTaaatttttgaatgaccttcAGATCAACCCCAGGTTAGGGCGCGGCCGGAAAGGAAGAAGCTGCGGTCACCATAGACTGGTGGAAAGCGTTCCTATCAGTCTCAAGGGACATTCGCAGAATGTGGAGCATTTGAAATGCACGATGTCTTTAATAATCAGTGTCTGTCTGAGTGGACAGATTTTCTTCTGGGACATAGCTACCGGGCATCGCCTGAGAGTGATCAAAAGGGCGAGTCGTGAACAGTCGGAGGTTGCACTAAGAAGACAGAACTCTACAGTGAAGAAGCCAAAGCAAAGGACCTATAAAGAAACGGAAAGAGGTCAGACTGCACAGCGGTATACCGGAGGATTGTCTAGTCCCAGACCGATCTCGGATATGGAGCGGCCTCAGGTTTGCTGTGAAATTGAATCAGAAGCAGCCAATGGAGTGCAAACGTCTGAAGAAGACTACGAGGCGCTGAAGCATGAGAAAGAATCAAAGGGGAATCCAAAGTCCTCTGGATACGACTTCAGTAAATATGCCAACGGTGCGGACATCCCCCCGTGGTCTCCCACCTCCAGACGCTCCTTCACAAGTTCCTGGTCCAGTGCTGATGGAGACGATCCTGGGTTGTTATCCAGTTCAGAAGAGTCTGGTGATGAGCAGGCTTTTGTACAGACGAATAGTTTCCAAGACAACCTGCTAACGGGAGCCTCGGTTTGGTGTTTGGATTGTTGGGGGGATTTTCTCGTGGTTGGATGCAGCGACGGTACAATTGAGatcTGGAGTGTGTTGTCTGGTGCGCAGTTATACGTGTCACGTGACAGTCCTATCGGTGTTAGTAAACTTTGCTGTTTGACACACAGCCCTCAAATTGTGGTGGCTCGTTTGGATGGCACACTGGAGTTCTTAACCCTTGGGGTGCCCACACGATGGGCCCTTCAAGAAAACTCCCCTATAAAGCGGTCCTCGCCTAGAGTTACGAGAAAATCTGAAGCGCAAACATCTAGAATTTTCGATGCGTCCAACAGCGAAGCCTCTACAGCAGTCGGCGTCAAAGGGACCCGCGCGTGCACTTCAATAGATAGTCCGCAGTGTAGGGTGATTCACAAACTGCGGGCTCACCATCAACCCATAAGTGTGCTGGGTGTCATGGAAGGACGGGTCATCACTGGAAGTCACGACAGAACACTCAAGGTTTTTCGGACTGATGAATGCGTGTGTGTTTACACATTACACGGACATGCGGACAGTATCACCGCCCTTACCATAGATAAGACAAATAACCGTCAAGTAGTCAGCGGCGCTGCTAATGGAGGCGTGCGCGTCTGGGATGTCATAAGTGGCGAATGTCTACAGCATCTTCGAGGTCACGTGAAATCCGTGACTGCTGTAACATGCACAGCGGAGCACTTGCTGAGCGTAAGTTTGGAAAGCGTGCTTTGCATTTGGGACAGGTCACGTGGCGAGTGTTTGCATCGTCTAAAACAGTTCCCAGATCTGTGCTCCAACGTCGCCATGCTGTCGAAAACTCTGTTTATTACAGGAGGACAGGGACACATTTCTGTGTGGGATGTCCGCACTGGAAGACGCGTGAAAACTGTGTTGCTTGGTGATGATGACACGACAGTTTTTGTGCGTTACGTGAACGTGTGTGACAATAAAACGGTCGTGTGTGATTTTGGAAAGGAAGTCAAAATTGTGACTTTTCCTGCCGTCATGGACAAGGCAGAATGAGTGTCATCGTAGTCTATTGATAGCAATTTAATTAAGTTTAATTAAGATTTTACATCCATCGTTCACTGTAGAAACGTTAAAAGGTAGTTCATGCATTTTGTTCCAATGGACAGGAAGGTGTTTTCAGCAACAACTTATCAAAACGATTGTCCGAGTGAGTGTAGttctgagaaggactgtttcgGATGACATTGTCAATGactgacatttcgacaacctgagcggaagtcatgtGCAGAGTTAATTTGTGTAATGAACACTCTGTGGTATGAACAGTGGTTTGAAAACTCTGGGGTCGGTTGCTCGAAGCGTGGTTAGCGCTggccatggtatttaacgctggttagcgctaaccatgcagcgaacaacccgggcctggggctcgtttctcgaaagtcccgaaaatttacgggccattttcgggtgtcacaattccctttgtatctcaaggaCGGAGGGGAAtgaagtcgtcaaacttcagtcagttttctttttgttaccttgaaaacatgttaaaagataggCGTTCATTTACAAGCGGTTGGCAAGTTtacaaatgacttttcgggactttcgagaaacgggcccctggtgtctgtttctcgaaagtcccgagaagcCAGttgtcaaactgcaatctgcttattttgaaaagctgttcctttaacatgtttttaatgtaagaaaaactgAGAGGATTGCGACGTTTGGTGGCTTagaacctcggcgttgcgaagatataaatGGAATTGTGGCAgccgaaataggcccgaaacgtatcgggacttttgagaaacagtcCACAGGTCGTttatgtgattggtcaattaagtCGTGATGTtatt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0JPH4	Sterol regulatory element-binding protein cleavage-activating protein OS=Xenopus laevis OX=8355 GN=scap PE=2 SV=1
Q6GQT6	Sterol regulatory element-binding protein cleavage-activating protein OS=Mus musculus OX=10090 GN=Scap PE=1 SV=1
P97260	Sterol regulatory element-binding protein cleavage-activating protein OS=Cricetulus griseus OX=10029 GN=SCAP PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004100 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12349 all species →	Sterol-sensing	Sterol-sensing domain of SREBP cleavage-activation	Family	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR000731 all species →	Domain	Sterol-sensing domain	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR030225 all species →	Family	Sterol regulatory element-binding protein cleavage-activating protein	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46378 all species →	STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0032933 all species →	Biological Process	SREBP signaling pathway	Interproscan
GO:0032934 all species →	Molecular Function	sterol binding	Interproscan
GO:0032936 all species →	Cellular Component	SREBP-SCAP complex	Interproscan
GO:0045540 all species →	Biological Process	regulation of cholesterol biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26682	SCAP; sterol regulatory element-binding protein cleavage-activating protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.