Gene detail

Detailed information of ENSTIFP00000002166.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_044173382.1, uncharacterized protein LOC114977110 isoform X1 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000002338

ATGTCTGCAGACGCTTCGTCGGACGCACGGAAAATCGGTGACACATTACGGCACGCTGTCATCCAGTGTTTCAAAGTTGTTCTTCTTGGTGACCCAAGAGTTGGCAAGACATCTCTTGTAAAGGCCCTGAAAAACAATGCTCATTCTTGGGATTTGCCCAACGAGTATAAACCAACTATAGGCGCTTGGATAACACATTTCGATTTGACTGACACTCGTCGACTTCTCATCACTGATGCATCTGGCATGCTCCAGGAATTTTCCCATCTCATCAATCTTTATTTGCGAAAAttgcattgtgttgtgtttgtgtttgccCTTGACGAGCCTGCTAGCTTTAGAAGACTTTCTCATTGGTACGACGTTTTTACGCGATCGTACACGGGCGATGCTTctcaagttgcaaaattcgtcGTCGGTACCAAAATAGACGTTGTCCATGGTATCTGCGAGCTGCAAAGAGAAGGGACTACTTTTGCAAAGAATATTGGAGCAGAGATGTGGATCACATCGGCGAGTAAGTCATTAAACACTCGTGAACTGTTTAGCAGAATTGCTGATAATGTGAATAAACTACTCGATAAGGAGCTGGTCTTACTGCAAAGTGATTTACAAGACGACAACTTTGCAGATTCAAATGCAAGTATGTTAGATGATGTGCTTCTCAGTAAAGGAGCCCTGGTGAGGTATCCCGATCCTATTCTCCTGGATACTGAAGGGGAAGAGATTTCAGAAATATTGCTTTCCTACCAGTGCGTTACTATGACTGGACAGAAAAGGACATTTACATGGGGTACATGGTCTAAAATTAGCTTAAAGGAAGCAGTGATTAGGCAGTCTTCGGGGACACCACGAGCATCAAGAAACAAGCTCTGGTCAAGTGTGATGGCAACTGCGCCATCGAGCACATGGCAGCATGAGAACTTAGAAGGTGTTATGAAGTATGGCACAGTCATCAGGAGACAACCCACTAAGACTGAATTCAAGAATGTTAAGAAGATGATTTTTACTTCGGgtGATCAGTTTGGTTGGGAAAGAAATCATGGATTATTTTACATGCTCCTCCAGAATGAGGGTAGAGTCTCAGAAGTTGGCCTGATGTCGGCTTCCGAAAAAATGTGTAAGACAACAGCTTCCCAAAGAGTCGTCGTTCAGAGAAATTTTCAACTCCAACCCTCGCAAATTGCTGAGCAAGTGATATCTGTAGACATGTCCTGCAGTCACGCAGTGGCTTTAGAAGGGGACAAACACATCGTGTCAACGTGGGGCCATGTAGACAGTGGAGCTCTTGGTCTCAAGCGACAGGATATATCAATTCCCACCCCCTTGGCATCAAATGACTGTCAAATCAAGCAGGTTGCCTGTGGTGCTGAGTTTACTTTGATGTTGACCGTGGAAGGCGAAGTGTTTTCTTGGGGAAAGGGGACATTCGGAAAGTTGGGCCATGGGGATGAAGAAGACAGACAATTGCCAACTTTGGTCACGACACTGAAAAACATGGTAGCCATCAATGCAAGAGGTGATCATGCTGCTGCCATAATGAAGGGAGGTTACCTTTACCAGTGGGGTCTTGAGTGTGCAGATCCACAGCTAACTCAGTTTGCTGCATCACCGAAGAAAGTTAGAAAAATCTCCAGTATCACAGTGAGGTCCATCTCTTGCGGCACTCATCATACTGTTATTACGGGTGACGGACAGTTTCTTTATTCTGGAATTCCTTATGCTTGGGGGAGGGGCTCCCATGGTCGCCTTGGTGTGGGTCACTGTCAGAATCTCTTTGCTCCAGTTTGTATTAACGCTCTTTACAACTCCAGAAACGTTGTCACGCAAGTGTCAGCTGGTGATAAGCACACTGCATTTTTAACAAAGGATGGAGAAGTTTACACGTGTGGTAGCAATGCTTTTGGGCAGCTTGGTTACTTTACTAAATCTGAGGGCAGTGATATACCGCGTAAGGTCTGTCTTGGGAAGAATGCTGCAGGAAGCGAAATCAGGGCGGAACAGATCTGTTGTAACGAAAACTACACAATGGTTTTGACACAAGATGCCGACGTAATTGTGTGGGGTAAATGCCACTATGGACAGAAGCTGGAGAACGCAATTCCTCTGAAGGACATCAGTATTCGTGATGTTACCACATGTGTTGTGTTGTTGGAAAACTCGTTCGTCGAGCTAACCGTTGCATTATCATTTGACAGCGAGCTGTTGATTTGTGCAGGAGtgcattttgattttgattgccAAGCTGCCGATGATACCATACCACTGATAACCTGCAACAAGGCCAACTTAATAACACTTTCTTCAGTGGAGTCTGTTTTGGTCAGTGTTGATGAAGAAGGTAAGATCTTCTACGCAGACCTAGGTTTGTGGGTTTATCAACTTTTACCACAGGGACAAAACATTCCATCCGAGAAACTTATACATGCCCTGTTCCAAAATATGAAGGAACACACTGAGCCTCCAAGTCTACCAGCATTGGAGTTTGTCCCTATACCATCATTTTGTGGAGGTGTTATTGCAGTTGAAGCGACTCTCAGCACGTTTCTATTCTGCTCCAGCATCGGTGATGTATATAGTTGGTATCCAGGCGGTCACGTGATGCATCACATGGAACTTAACAATGAGATAATAGTGCAAATTGCCTGTGGAGCAAGCCACTGTGCTGCTCTATCAACCGAAGGAACTTTGTTCACATGTGGTGAAGGTGGCTCTGGTCAGCTTGGCATTGGTTCCTTTAAATCTGCCCAAACATTCCAGTTAGTGCCATTGACAGAATTTGAAAGAGTGAAGAATGTATGCTGTGGATGGGCAAGTACTTCTGTTGTTACAGAAAACGGAAAG

Transcript

ENSTIFT00000002338

attgtacaatACAGCATTGTTatatgtgtctctagagattggtgtCCCTTAACCAGTTTGCATTGACAACCTCCAACAACttcaaaaactgcaaaagaGCTAGCATTCTCTAATTCAAAAATCGCCACAGAACATCCATTGTGTCTCCTTTCCATCAGTGCCCAAATCAAACGACATCATGTCTGCAGACGCTTCGTCGGACGCACGGAAAATCGGTGACACATTACGGCACGCTGTCATCCAGTGTTTCAAAGTTGTTCTTCTTGGTGACCCAAGAGTTGGCAAGACATCTCTTGTAAAGGCCCTGAAAAACAATGCTCATTCTTGGGATTTGCCCAACGAGTATAAACCAACTATAGGCGCTTGGATAACACATTTCGATTTGACTGACACTCGTCGACTTCTCATCACTGATGCATCTGGCATGCTCCAGGAATTTTCCCATCTCATCAATCTTTATTTGCGAAAAttgcattgtgttgtgtttgtgtttgccCTTGACGAGCCTGCTAGCTTTAGAAGACTTTCTCATTGGTACGACGTTTTTACGCGATCGTACACGGGCGATGCTTctcaagttgcaaaattcgtcGTCGGTACCAAAATAGACGTTGTCCATGGTATCTGCGAGCTGCAAAGAGAAGGGACTACTTTTGCAAAGAATATTGGAGCAGAGATGTGGATCACATCGGCGAGTAAGTCATTAAACACTCGTGAACTGTTTAGCAGAATTGCTGATAATGTGAATAAACTACTCGATAAGGAGCTGGTCTTACTGCAAAGTGATTTACAAGACGACAACTTTGCAGATTCAAATGCAAGTATGTTAGATGATGTGCTTCTCAGTAAAGGAGCCCTGGTGAGGTATCCCGATCCTATTCTCCTGGATACTGAAGGGGAAGAGATTTCAGAAATATTGCTTTCCTACCAGTGCGTTACTATGACTGGACAGAAAAGGACATTTACATGGGGTACATGGTCTAAAATTAGCTTAAAGGAAGCAGTGATTAGGCAGTCTTCGGGGACACCACGAGCATCAAGAAACAAGCTCTGGTCAAGTGTGATGGCAACTGCGCCATCGAGCACATGGCAGCATGAGAACTTAGAAGGTGTTATGAAGTATGGCACAGTCATCAGGAGACAACCCACTAAGACTGAATTCAAGAATGTTAAGAAGATGATTTTTACTTCGGgtGATCAGTTTGGTTGGGAAAGAAATCATGGATTATTTTACATGCTCCTCCAGAATGAGGGTAGAGTCTCAGAAGTTGGCCTGATGTCGGCTTCCGAAAAAATGTGTAAGACAACAGCTTCCCAAAGAGTCGTCGTTCAGAGAAATTTTCAACTCCAACCCTCGCAAATTGCTGAGCAAGTGATATCTGTAGACATGTCCTGCAGTCACGCAGTGGCTTTAGAAGGGGACAAACACATCGTGTCAACGTGGGGCCATGTAGACAGTGGAGCTCTTGGTCTCAAGCGACAGGATATATCAATTCCCACCCCCTTGGCATCAAATGACTGTCAAATCAAGCAGGTTGCCTGTGGTGCTGAGTTTACTTTGATGTTGACCGTGGAAGGCGAAGTGTTTTCTTGGGGAAAGGGGACATTCGGAAAGTTGGGCCATGGGGATGAAGAAGACAGACAATTGCCAACTTTGGTCACGACACTGAAAAACATGGTAGCCATCAATGCAAGAGGTGATCATGCTGCTGCCATAATGAAGGGAGGTTACCTTTACCAGTGGGGTCTTGAGTGTGCAGATCCACAGCTAACTCAGTTTGCTGCATCACCGAAGAAAGTTAGAAAAATCTCCAGTATCACAGTGAGGTCCATCTCTTGCGGCACTCATCATACTGTTATTACGGGTGACGGACAGTTTCTTTATTCTGGAATTCCTTATGCTTGGGGGAGGGGCTCCCATGGTCGCCTTGGTGTGGGTCACTGTCAGAATCTCTTTGCTCCAGTTTGTATTAACGCTCTTTACAACTCCAGAAACGTTGTCACGCAAGTGTCAGCTGGTGATAAGCACACTGCATTTTTAACAAAGGATGGAGAAGTTTACACGTGTGGTAGCAATGCTTTTGGGCAGCTTGGTTACTTTACTAAATCTGAGGGCAGTGATATACCGCGTAAGGTCTGTCTTGGGAAGAATGCTGCAGGAAGCGAAATCAGGGCGGAACAGATCTGTTGTAACGAAAACTACACAATGGTTTTGACACAAGATGCCGACGTAATTGTGTGGGGTAAATGCCACTATGGACAGAAGCTGGAGAACGCAATTCCTCTGAAGGACATCAGTATTCGTGATGTTACCACATGTGTTGTGTTGTTGGAAAACTCGTTCGTCGAGCTAACCGTTGCATTATCATTTGACAGCGAGCTGTTGATTTGTGCAGGAGtgcattttgattttgattgccAAGCTGCCGATGATACCATACCACTGATAACCTGCAACAAGGCCAACTTAATAACACTTTCTTCAGTGGAGTCTGTTTTGGTCAGTGTTGATGAAGAAGGTAAGATCTTCTACGCAGACCTAGGTTTGTGGGTTTATCAACTTTTACCACAGGGACAAAACATTCCATCCGAGAAACTTATACATGCCCTGTTCCAAAATATGAAGGAACACACTGAGCCTCCAAGTCTACCAGCATTGGAGTTTGTCCCTATACCATCATTTTGTGGAGGTGTTATTGCAGTTGAAGCGACTCTCAGCACGTTTCTATTCTGCTCCAGCATCGGTGATGTATATAGTTGGTATCCAGGCGGTCACGTGATGCATCACATGGAACTTAACAATGAGATAATAGTGCAAATTGCCTGTGGAGCAAGCCACTGTGCTGCTCTATCAACCGAAGGAACTTTGTTCACATGTGGTGAAGGTGGCTCTGGTCAGCTTGGCATTGGTTCCTTTAAATCTGCCCAAACATTCCAGTTAGTGCCATTGACAGAATTTGAAAGAGTGAAGAATGTATGCTGTGGATGGGCAAGTACTTCTGTTGTTACAGAAAACGGAAAGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9FN03	Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1
Q9VR91	Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3
O95714	E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008705 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13540 all species →	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051553 all species →	Family	Ran GTPase-activating	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45982 all species →	REGULATOR OF CHROMOSOME CONDENSATION	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000002166.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.