Gene detail

Detailed information of ENSTIFP00000002545.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029185179.2, nucleosome assembly protein 1-like 1 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000002737

CTGACCTAAAGGCCTTACGTTATTGCAGGCGCTGGAGATCTTTTACCACCTCGTGGCTGCAATTTTCTCCACTGGACGAGATTAATTTCGACCTCCATCAGCTTTCTGTGATAGCTTAACAGTACCACCATGTCAGACTCTGGAAGTGAAGGAGATCCAACAGGCAGCTTACCCCTAAATGAGGCAACTGCTGCAATCATGCAGAATCCCCGAACCCTAGCAGCTTTACAGGCAGGTTTGAATAGAATTATTGGACAACAATCGGGATATATACAGAGtttaccCAAACCAGTGAAAAGAAGAATAAAGGCTCTAAAAAACCTGCAGGTGGAATGTGCTAAAGTGGAAGGAATATTTTATGAAAGGGTACATGCTCTTGAGTGTGAATTTGCTGAAAAGTTCAAGCCACTATTTGATAAGCGCCGTAGCATTGTTAATGGGCTAGTTGAACCAACTGATGAAGAATGTCAGTGGCCAagtgatgaagaagaagaagcagatgaaaaagaagagaaaggtGAAGGGGATGTTTCACAATTGTCGGGTGACGTGAAAGAGAAGGTAACTATAGAAGACGAAGAGAAAGTGGAAACAACAGATCTCCCAGATGATGTAAAAGGGATTCCGGAGTTTTGGCTAACAGCAATGAAAAATGTAGACACATTAGCTGAAATGATCCAGGAACATGATGAACCAATCTTAAAACATCTCCTTGATATCAGAGTTATATTCACTGGACCAGACAGTAATGTCGACACGACACAGTATCCACAGCCAACTCCAATGGGATTTGTGCTGGAGTACCATTTTTCACCAAATCCATTCTTCTCAAATAATGTTCTGACAAAGAGTTACAAAATGAAGTGTGAACCTGATGATGACGATCCATTTGCATTTGAGGGACCTGAGATAATTAGCACTTCAGGTTGCCACATTGATTGGAAGAAGGGAAAAAATGTCACACAAAAAGTTGTAAAGAAGAGGAAAGGTTCTCCTGGGAAAGGACAGACCAGATTTGTCCGCAAAACAGTAAAGAATGattccttttttaatttttttgcaccaCCTGAAGTTCCTGAAGATGAAGCTGATATGGATGAAGAAACAGAGGCTCTTTTAGCTGCTGACTTTGAAATTGGTCATTTCTTCAGAGAGAGAATAGTTCCCAAGGGTGTGTTGTACTTCACGGGAGAAGCTCTGGAAGATGATttcgaagaggaggaagaggaggaagGTGACGAAGCAGAGGAAGGGGATGGTGAGGAAGATGACGACGATGACCCTGATTACCAACCACCCCAGGATGGAGAAAAACCCCAGGAATGTAAAAACCAGTGATGGGAAACTGACGTCTGATTTGAAGGATCGAATTGTTTGGTTTAAAGTCCGACATGACAATGGACAATGGAACATGAACTTTCTATTTATTTTCTGAATACCTGCAAGTAGTAGATTTTCACAATAGCGTTAATATTCTATCACACGCGATGCCATTCACTGTTGGCTTATCGAAAAAGTGCTTTCAGAACCTTGAGGCGGGTAGATGTTCCGGGTCGAAGATGTTAGTATGTCGTTTTCACCATCCCGAGGGAGATTGTAAGCGATTTAATGTTGATCCTACTGGATTCAGTTTCGTAGTGTCACAATTTGAAAGTATTCAGTGCTGCAATTTTCGTCGTGTGATCATCGCGGCTTTTTCGACTTAAATTCTTTCAAGGTGTTGCCGAAAAGCTTGCATGAGATTCAAGAAACTGCCCCGTCTAACAGTTTTCGTTTGATGAGCAAATAGTCTTGTAAAGGCAATTCCCACTTCTGGCCTACACTGagtggaaaaataaacaatccaTAACTTAAGAGCAAGGAAAATTGATTCCCTGATTTTTAActtgttaacaataattaacaataattaacaattgcAATTTATTCTTGCGGACATTGTGAGATAAGTCAGAAGAAATTGGCTTTTAAATGGCTAGCTGTAACAGGGTTGAGCTTGGTTTCTTTTATATCGCAAAGCCTTGCTTTTCTTCTCGGCACAGATCATTGTTTCCGTTCGATCGACTATTAAAAGCGGAAAAGTAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4U0Y4	Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis OX=8355 GN=nap1l1-a PE=1 SV=1
Q28EB4	Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis OX=8364 GN=nap1l1 PE=2 SV=1
P28656	Nucleosome assembly protein 1-like 1 OS=Mus musculus OX=10090 GN=Nap1l1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004598 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00956 all species →	NAP	Nucleosome assembly protein (NAP)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002164 all species →	Family	Nucleosome assembly protein (NAP)	Interproscan
IPR037231 all species →	Homologous_superfamily	NAP-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11875 all species →	TESTIS-SPECIFIC Y-ENCODED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006334 all species →	Biological Process	nucleosome assembly	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11279	NAP1L1, NRP; nucleosome assembly protein 1-like 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.