Gene detail

Detailed information of ENSTIFP00000003351.1 in Montipora efflorescens

Genomic Location: BLFP01000554.1:350949...360257
NR annotation: XP_015764374.1, PREDICTED: uncharacterized protein LOC107343330 isoform X1 [Acropora digitifera]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTIFT00000003602

NNNNNNNNNNNNNGCCGCTCACGCTGCCTGATTAAtgctgtctttgttttttggcAGACTCGATCGGGAAGACAACTGATGCAAACTGGTGAGCCTTACTCAAGTGAAGCATCAAGAGGAAGGAGAAAAGCAGGGAACATCTCAAGGATATTCAACAATCAAAAGGAACGCGAAGAAAATGGCTGGAGTTATACTGGAGAGGGCATTGACCATGTTCTGACCGCGGGCAGTCCCGTCTTGAACGTTGATTTAAGTGATCGCGGTACAGGCAACTTACACAGTGATCCGTTTCCAGGTGGATACATTGATAGTCTTAAACAGATTATGGAAATAGAAGAGAGGCCCACAATGGGAAATGCAATAGATAGCGCGCCCTTTGCTGGTGATAAAAACGGTACTGAACCGAAGCGAGCGCGTCGATCGCGCACACGTAATACTTCGATGTTGGAACGCCTGGCGCCGACGCCCGGTTACGTTGATAAGACTTCACTGGATGTGGAGGGTGGCTCTTTAGCACAGAGAAGAACACCGCGAATGGCGAGTTTGAACGCTGCCGCTAAAGTTAATGTGTTTTTTGAGCCTTCGAGTCCCTTAGCGGGACGAAGCATGTTTGAAATACAACAACACAGTCACACCACCAAGAAGCCACCTACTCGGAGCTCTACAGAACGAAGGCAGTCGGACAGGTCGGAGAATAACCTCGGAAGGGAAGAGTATGTAGACTCGGATGTGTTCGTTCAGGGCGAAGTGACTTCCACATGGGACGCCCTCAGATCTAAGGGCGTAATTGTCAGCCCTAATGAATTTGACAATGCTGAGACAGTGGAGGATGGCTCTTGCggtcattttgaatttttcactaacggtcacagaggtgggaaaGATAAAAGAAAGCCAGAGGCTGATTCCACTTCGGAAGATGAAAGAAATGCCAAGAGAATTCATTTAATTGGTGATATTGAGAGCCGAGACACAGGCGTGAAGGAGACGATGGGTTTTGATGAAGGCGAGATAGAATGCGATACAACGACTGATTCTCCACCAAAGACAATGGTGGATGTTTGCATCCAGGTGGACTTACCGCGACCACCTGTCAAACACGTGCGAGTTCTTTCTGTACCAATCAAAGGACAACTTGTGACGTCAGCTGGCTCGGTTCCGTTTACCAAGAGTCACTTGGTCACACCTGTCACGCCATCTAAACCACCTCCTGAGCTGAAAATGAGCAAGACTGCCGTAACGAGACGGACTGTAGGGATGAACAACCAGGCTATGGAAAATGTGTTCGTCGCTAATGACGGGCCTTTTGCAAAGTTCAAAGCTGTTGGTGGTTTAATTGACGAGCGAAGTAAggcaaagaaagcaaaagaactcACCAATAAAATTCCAGCCTCTTGCCCACCCCCTGTTACTTTAAAGATCCCTAAGATAAACTTTGCTGCTACATCGACATCTACTATGAGCGCTGGACGCGGCCGGCCCGCGGGCAACCCTTTGAAAAACGTCCATTTAAAGAACTTGAGTCAACAGCTTGAGAAATTAGCCGCAGAGAGAGCGCGTGCAGAACCCAGGGTTCCCAAGAGAACCAATGGCTGGATGTTTATCGGTGAAGCCCTGGACAAACCTTACTGCTACGACGAGACTATCGTGATACGGCGGTACTACAGTGGTGTTCAGCGGGGAGACGAAATTATCAACGTCAGGGACTCGGTTCTACTGAAATCAGGCACGCGCAAGAAGGATCCTCCATTTGTTGCGCGTGTTTCAGGGCTCTGGGAAGAAGATGACGGTCCAAATGCCGGTGAGATGATGATGAGTGTGTTTTGGTATTATCGTCCAGAGCAGACTGAAGTCGGGAGAATTCCAAACTTCCATGGAGAGATGGAAGTCATGGCATCCAAGCACAAGGATGACAATAGCGTGGCGTGTATTGTGGACAAATGTTACGTTCTCAGCTACCCTGAATACTGCAGGTACTCTTCGCCATATCTTGCGATTCTCGGTTTTAGTAGAGAATTGGGAcagctgcatttaccctcaccaaaaagagacatacaccttattccaaaatggccgctgatttatgcggatacaaattggcccttgttgcctcgttcaagataa

Transcript

ENSTIFT00000003602

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q497V6	Bromo adjacent homology domain-containing 1 protein OS=Mus musculus OX=10090 GN=Bahd1 PE=1 SV=1
Q8TBE0	Bromo adjacent homology domain-containing 1 protein OS=Homo sapiens OX=9606 GN=BAHD1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004999 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01426 all species →	BAH	BAH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053032 all species →	Family	Bromo adjacent homology domain-containing protein	Interproscan
IPR001025 all species →	Domain	Bromo adjacent homology (BAH) domain	Interproscan
IPR043151 all species →	Homologous_superfamily	Bromo adjacent homology (BAH) domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46576 all species →	BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005677 all species →	Cellular Component	chromatin silencing complex	Interproscan
GO:0031507 all species →	Biological Process	heterochromatin formation	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23714	SH3D19; SH3 domain-containing protein 19	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.