Gene detail

Detailed information of ENSTIFP00000005998.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_044174971.1, bromodomain adjacent to zinc finger domain protein 1A-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000006409

AGGACAGCGAAGCCAGTTCATCTGGTGATGAGTCAGACGGTCATGAAGATTATTGTGATATGTGTGGTGAAGATGGCGACTTGATCTGCTGTGATTCATGCCCTCTTGTTTTCCATACAACTTGTCATCTTCCTCCTCTGAGGAATATACCACGAGGGGCGTGGAGTTGTTGGAAGTGTCGTCAGCCTAAGAACAAGAAACAGAATAAGGATCTTCAAGGTGATAGatcgacaaaaacaaaaggaccGAAAAAGAACTCCAAAACACTCACTAGACGAGACAATAGCCCTCCAAGGAAAAGCAAACGCAAAAGATCCCGTTCTCTAAGTTCCGAAGAATCAGTCAACCAGAAGGTCTCAAAACAGAGTCAACGGGCAGAAAACGAAACCGCTCATGACCAAAGACACAGAGCACGTCCGTCAAATGAGAGTATCGTTGGCGAAAAGGTTTCCAAAAAACAAGCGTCCACACAAAAAGACACCGTGTTGAGCAAACTAAGACGGAGATACCCGCGAGATTCCGCCAGCAATGACGAGACTTCCAACACAAATATTCAATCGTTTTATGGTCGTTCAACCAGAAGCACCCGTCAGCGGAACGTTTGCGACCACAAGAATAATAGCGATGAGCAAAGTGAAAATCAAGAAGTCGCGGGTTTCAAGAAGACACGAAATCGCCCTGGCTATGAGTGTCGAAGAAGCAGACGCGGTCAGATCACGGGTGATCCCGGAAATGAGGATGAAGATAACGAGATGGAGGGAAAGGAGAACCGCCGAACCTCTCGGCGCAAGAAGAGTGGTCTCGCCAAAACGGAGGAACAATCTACTCGAAGATCTACGAGAAATCAAGGACGGGCGTCAGGAGCATCTGAAGAATCCGATGACGATGAAGAAAGCGAGTTAAGCTCCCTGGATGAGTCAGTGGACAGTGGTCCTACCATTCCAAGAGACGGTATATCGAAGAGGAGCCCGCTGAGAGACAGATTGCTTGAAGCTAACAAGTCCAGAGGGAAAGGAAAAATACCAGAAGGACTAACCAATAAGAAAAGTGTTAGTTCTGTAGTCAAAGACCGACaagcaaaaacacaaaatttcaCAAGACACTGTGTGCAACatgaggaaaaaaaggaaaaacggcGGCGAGTTAACGCAGAGATGGCTTCCTGCGAGCAAATCTTGAAGACTCTCATGCTTCATAAAGATAGCTGGCCTTTTAGACAAGCGGTTAACCTGCGAGAGGTTCCAGACTACTTAGAACTTGTTAAAACACCAATGGACCTTGGCACTATGAGAGAAAAGCTGAACAGCGCCGAGTACCCGGATGCGGAGAGTTTTGTGGCCGATGTTCGACTTGTGTTTTCCAATAGCGACAAATACAACCTGGATACTTCGGAAGTGGGGAAAGCTGGTAAAAGCCTGGAGAAATTTTTTGACCAACTTTTTGAAGATAGTTTCTTTCACAACGACCAAAAATCCAAGAATCAGCGAAAACGATAATTATAGGATAATATTAACATTTTTCTCGAGCATCGTAATGTTTAAATCTCTTCGATGGTATGATTTTAAATTGGCTGCATAACTAGTCATTTGGAcagattttcttttactttaaaaccgagAGATGGCGATATACGGTTGTGGATGCTGCCCTGCATGAAATTCGCGAGTTGTGTCGTTCATCTGAAGTTGTTTTTTATTTCGTGTCTTTTATGCTTTGTACCCTTGAATGCTTAACTGTAAACGTCATTGTGAGTCAATTGGGATAGATGCGCAATACATACCGTAGTTACAAGATGAAACGGCGCgggaaaatttcagtttcgtcgacggtcgttgccatttgtcCGACACttggaacaattttcactgttaagtttgtcgttttcGAGGAAAAAAATAGTTAACCTGGGACTAGATAAGCAGCGTGTGTCActtagaattttgaaaaaagcctTAGAAAAAGTTAGGGGAACCATGTCGAACTCGGTTCAATGGCTGAAGAGCTAACGCACTTAACCACTACACTACCGAAACAAGAACTCCAAAGAGaagcaattttaaagtatttaaatgaagctaaccgTAACAATTGATTGACAGCTACCTGAATAAAAAGGGTTGGTTACTATGactggcaacgaccgtttacgaaacgtAAATTAGCAACGGCGCCCTCGAACAAACGCCGCGCCCAATCAGAAGAATGCGGTGTTTATTGGAGGATTATAAGAAAATAAGAAACACGAACGGTACAAGTCTGCAATCTTCATCATTCTTAGCGAATTGGCGGAACACTGGCATTTGAAATGGGTTTCTGTTTTACATAATACTTACAATGATTTaagaaaaaagtgatttttaaaTGATGCTGCTGCGTTTAATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WZM0	Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=GCN5 PE=3 SV=1
O88379	Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus OX=10090 GN=Baz1a PE=1 SV=3
Q9NRL2	Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens OX=9606 GN=BAZ1A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003139 (this species only)
Ubiquitin family	E3\|E3 activity RING\|PHD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00628 all species →	PHD	PHD-finger	Domain	Interproscan
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR018359 all species →	Conserved_site	Bromodomain, conserved site	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45915 all species →	TRANSCRIPTION INTERMEDIARY FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13193	RBM27; RNA-binding protein 27	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.