Gene detail

Detailed information of ENSTIFP00000006122.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_020612562.1, vacuolar protein sorting-associated protein 18 homolog [Orbicella faveolata]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P59015	Vacuolar protein sorting-associated protein 18 homolog OS=Danio rerio OX=7955 GN=vps18 PE=2 SV=2
Q9P253	Vacuolar protein sorting-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=VPS18 PE=1 SV=2
Q8R307	Vacuolar protein sorting-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Vps18 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003470 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSTIFP00000006122.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR000547 all species →	Repeat	Clathrin, heavy chain/VPS, 7-fold repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23323 all species →	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0006904 all species →	Biological Process	vesicle docking involved in exocytosis	Interproscan
GO:0007032 all species →	Biological Process	endosome organization	Interproscan
GO:0007033 all species →	Biological Process	vacuole organization	Interproscan
GO:0007040 all species →	Biological Process	lysosome organization	Interproscan
GO:0008333 all species →	Biological Process	endosome to lysosome transport	Interproscan
GO:0030674 all species →	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0030897 all species →	Cellular Component	HOPS complex	Interproscan
GO:0048284 all species →	Biological Process	organelle fusion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000006122.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.