Gene detail

Detailed information of ENSTIFP00000006160.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029203751.2, LOW QUALITY PROTEIN: sodium channel and clathrin linker 1-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000006578

AATCACTCCTCATTATTTAATGTCGATTATTTTTACTATTTAttcctttgttttgcagttAAGAGACTTAATGCAGTACTCCAGGAATACCAGAAAAAGTACCTCCCTGTTAAAGCACCAGATGTAAAGAGTGATGAGCCTCTTCCACCATGGATAACAAACTCCAGTATTCTTTCACCTCTGCTGTCAGAGTATGATAACAACATTAAGGCATACCAGGAACAAGTGTTTTTCTTGaaggtaaaaataattttaggcTATTCATTTCAAATTGTTGACGAAAAAGTGAGAGAATTGAGGAGGAGCATTGAAACACAGATGGAGATAGTACGACAAGGTGAAGGAGGCAGTGCAGAAAGAGAAGTGCTGGAAAATATGCGCCACCAACTTCAAATTCTGTCTCAGGAAAGGGACAGCTATGTGGAACTGTGGCAAAATGCTACCAGTGAGTTGGAAAAGCTTCAGGAAATCGAGAGGGAAAAGGAAGTTGATCTTAAAACCAGATCAAAGAATTTGGCAAGCTTGCAGAATGATCTGCAAAAGGCAAGACAGTTTGCCAAGGAGCTGCAACTAGTAAACAGGAAGTTGAAGATGGAGCATGAAAAGTTTCTCTCTACAGCTCAGACGCAAGATCAAGAGATCGATGAAGTGCGAGGTGAACTAAGGAGGTGTAAAATCGAGTTGAAAAGCTTCAAAGCTCAGAATGAAGAACTCCGCAGGACGCTGGACTTAATGGAAGGGCGAATTAGAGCGAGGGACAGAGAGAGAGGTGAAGGATCGAATCGAGACCAAGAAGCCGTTGATGCTCGGTTAGAGGAGTTACAAACAGCCCATACATGGAAGTTGAGttCCCAGCTAGAACGACGGGAATTTGAGGCCATCTCGCACGTGAGAGACAGCGTTCAGATGGTTGAAAATGCCATCCTTGAGAGAGACCAGGCCCTTGTCCGTGAGCAACAGAAAGCCCAAGAGGTCAACAGACTACAAGAAGTAATCAATAAACTATTAAGAGAAGCTGGAAAAAGAACTAGGGAAGAGGTAGATGCTGTACGAAAGCAATGCAACAAGAACATCCAGAAACTAATGGAAGAGCTGCACTACTTGGAAATGCAAGGAGCCGAGAAACAAGCTCAGTTGGAGAGATCACTTCGAGAAAAGTCTGCAGTTGAAAAAGAACTTAAGAAGGTGACTGATATTGGGCTTGGTTGGATGCCTGTATATGGCAAGGGTAACTGGTTGATTCGCCCCCGAGGTCGATCGCCCCCATGTAGAGTAGGTCCAGTCACTCATTTTGTAATAAGACATGAACAAGAAAAATCTCATGGCGAGTCACAAAACGGCGAACTGAAGAGGAGGCTAAAAGATTTGGAGGAAGAAAACGAGGAAATATCAGAGAGCAGAATTCAGTTGATTGATGAAATTGATAAACTGAAACGCGAACTTCTGTCCGCCACTCAAGTTAAGGAAAATGCACAACACCAGTGTGTTACAGAGGTAATTTCCACCCTCAAACAACAGCACGAATTGCGTGAAAAGGAGTTTGAAACGCGACTGCGCAGTGTAGAAGAAACGAACAGGCGGTCAGTCAATGAACTCAGAGACATGTTAACGGCACAGCAGAAACTTGGTGCTCAGTGGAAAGAGGAATCAAAAGCGGTGACGCATAAGTTTGAACAAACGCTCGAGGCCAAGATTATTTCCGCGAAGCATTCAGAAGATAAACTTCAGAGCATGGTGGTTGACGCAGAAACCAGAGCAGATGCTGCAAGTACTCAAGTATCAACACTTTTAAATCGCGAAAAGCAACTTTTAGAGGAGCGGAAATTGTTAAACCGTGAGTTTGAGCGACTTAAACTACAGAAGAGTCGACCAGGTTACAGCCGAATCCGGGAACCTCCTCAGCGACTGTCTGATCTGCTGACCACGACGATCGCTGGCCCGACTGTACACGATCCTGCAGTTCGTTTGGACCTCATGTCTCCGAGAATTGACGATCGCTTTTCCCAAGACTTTGATGGCACTGGTCCGCGAACGTTATTAAACGGAATTTCAACAGATAGAGTTATTCTTTAA

Transcript

ENSTIFT00000006578

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96NL6	Sodium channel and clathrin linker 1 OS=Homo sapiens OX=9606 GN=SCLT1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003174 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSTIFP00000006160.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR038911 all species →	Family	Sodium channel and clathrin linker 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35970 all species →	SODIUM CHANNEL AND CLATHRIN LINKER 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0045162 all species →	Biological Process	clustering of voltage-gated sodium channels	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000006160.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.