Gene detail

Detailed information of ENSTIFP00000006191.1 in Montipora efflorescens

Genomic Location: BLFP01000669.1:669814...686111
NR annotation: XP_029186131.2, integrator complex subunit 10-like isoform X1 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTIFT00000006611

ATGGCCGCCGAGCCAGGCTGTTTTGCAGACTCTCAGTGGTTAGTGGAAAGAGCGAGACAGagcttgaaagaaaataatccTTTTGAGGCTAAAACGTGGTTAATAACTGCTAAGACCTTATATCCCAAAGATTTTGGAGTTCAGTATGAAGCCTACAGTATGGAAAGAAATGACGAAAGAGTACTTGAGTCAGCCAAACTATTTCATCACATGTTTGAGCAATTTCCAAACAATGATTTGCTTTGGAAGGAGGTCTCAAGTTTTACAGATGCCCTTGAAAGTGAGGTTATGGATCCCCATAGCAAGTTTTTGACAGACATGTTCAGCTGTCTTCCACAACATGTTCAGAGAGAGATACTTCTTAAAGCTGCAGGAAGATGCCGAGATTGCATTGAGAAATGCAGAATGATGCTGCTTCTCATGAGAAGATTTCCTGATGTGATTCCAAGGAATGGGGTCAATCTGATGGAAATGTTAATTGATGCAGAAAACACTGAATATCCTGGTGCACCTGTAAATCCATATAGGAAACTGTTAGTGTGTGATGTCTTACCTCATTTACTGGCCAGTGACAACATGACGGTGGATATTGCAAATGACAAGGGTCCCGATAGGCAAGAAGAGGAGGACTGCTCTCCTGAAGTCTCCTTACATCAAGTTTACAAGTGGTTGGAGCTGTCCATCCAGTTTTATGTCACATGTGCCACAGCTCACAATTCTTTGTCTGAAAGCTTTGATACTCGGCTTAGCAGTGCTGTAGACAACAGTATCCTTGCGGAGGTTTTGGACGACAAGGGACCTTGGATGGCTCTTCATGAGCTGTTTTACTTGGCTGCAAAGAAATGTGGTTGGATTGACATTTGTAAAATTTATGAACGGCTTGATCCTCAAAAATATAAAAGCAGTAGTGATCAATGGAGCAGTATTTATGAGCTACATCATAAATTAAAGAAGATGTCAAAACATAGTTTAGAGGAGGGTATGGATGAAGACTTGCTGGAAAAAACTGGAGTCATGTTTGCCGCCACCATACTATTTCTGCAGACTGTGTGGGAATACTGTCGTGTGGTCAATAGGCTTGATTCAGTTTGTAAGTGGTTGGGAAATGTGTGCTtctcgttgttgttttttttttcctgtctttcTTCTTGGTTTGGTGGACATGACTCCCTTGGGAAAGGGGATGGAAAGGACAAACAGTTAATGCATGTTATCATTGATAAAAATTGTGGCTCTGTTAGTCAAAGCCTGTCAGATGACTTTACTGTATCTGTAGAAGCATGGCATCTCCTCAACACACATGCTGATTACAAAAATGATTTTAGTCGTCTTTTGGAAGAATGGAACGTTGAGCAGTGGACCTGGATAACAACTTTTCATGTTGACCGACTTATTCATAAGGGAAAATACAAAATAGCAGTAGACTTCCTGCAAGAACAACGGTATTCTCTGGAGCAGGATACCTTATCAAATCAAGAGttattGATAAGAGGCGCTGTTCAACTATCCTGTTGTTACTACCAGCTTGATGATCATAAGAGAGCCTGTGAAGAAGCTCTTAATGCTCTTCAGTTGTTTTCGTCAAGAGTCTCGCCAGCAGATAACATAGCACTGAAACGATCGACGTCAATTCCTCATGGGAAATTAGATTCAAGTGGGACAGAGCCTTCAACGACCTTGTCATCGCAAAGTCGCTGTTTGAGATTGGTGCCTTGCAGCGAGTCAGAAGTTCTTTCCTTTGCCGTTCGTTTACTGCTATCGTCTTTGAAGCAAAGGTTAGCCACTGAGGGACGCAATGATACCCTTATCGGTCACGTGATAGTCTTACTACAATATGGTTGGCCCAAGGAGGAAGGAACTTTTTACGAGCTTCTCGATAAGATCCGTGATAATGGGGGCTTGAAATACAGAGTGTTTTTCGACTACGTGAATAATATTGACATTTTAGAGGAATTTGCGCATCTTTATAGCGACGCCTCTTTTAATCTTGATCTTATTCCTGCTTCTTCTTCTGGCTCCAGTAGGGCAGTGACCCGAGGAGTTAACAAGGGAGTGAAAGAAGATTTCCGAGCTGCTCTAGAGAGACAAATCTGCCGCAGTGATGATAGCTTTGAACCATTGCTGAGAGAGTTTTTTCAAGACGAGAAGGAATCACTTCTCATCAACTGA

Transcript

ENSTIFT00000006611

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6TNU3	Integrator complex subunit 10 OS=Danio rerio OX=7955 GN=ints10 PE=2 SV=1
Q5ZLS8	Integrator complex subunit 10 OS=Gallus gallus OX=9031 GN=INTS10 PE=2 SV=1
Q8K2A7	Integrator complex subunit 10 OS=Mus musculus OX=10090 GN=Ints10 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004087 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21045 all species →	INT10	Integrator subunit 10	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026164 all species →	Family	Integrator complex subunit 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16055 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016180 all species →	Biological Process	snRNA processing	Interproscan
GO:0032039 all species →	Cellular Component	integrator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13147	INTS10; integrator complex subunit 10	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.