Gene detail

Detailed information of ENSTIFP00000011752.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: CAH3103444.1, unnamed protein product [Porites lobata]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q60482	DNA-directed RNA polymerase III subunit RPC9 OS=Cavia porcellus OX=10141 GN=CRCP PE=2 SV=1
A0JN61	DNA-directed RNA polymerase III subunit RPC9 OS=Bos taurus OX=9913 GN=CRCP PE=2 SV=1
O75575	DNA-directed RNA polymerase III subunit RPC9 OS=Homo sapiens OX=9606 GN=CRCP PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009054 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03874 all species →	RNA_pol_Rpb4	RNA polymerase Rpb4	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005574 all species →	Family	RNA polymerase subunit Rpb4/RPC9	Interproscan
IPR038846 all species →	Family	DNA-directed RNA polymerase III subunit RPC9	Interproscan
IPR010997 all species →	Homologous_superfamily	HRDC-like superfamily	Interproscan
IPR038324 all species →	Homologous_superfamily	Rpb4/RPC9 superfamily	Interproscan
IPR006590 all species →	Domain	RNA polymerase Rpb4/RPC9, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15561 all species →	CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0030880 all species →	Cellular Component	RNA polymerase complex	Interproscan
GO:0005666 all species →	Cellular Component	RNA polymerase III complex	Interproscan
GO:0006384 all species →	Biological Process	transcription initiation at RNA polymerase III promoter	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0044237 all species →	Biological Process	obsolete cellular metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000011752.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.