Gene detail

Detailed information of ENSTIFP00000012709.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029188910.2, mesoderm induction early response protein 1-like [Acropora millepora]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000013638

CAAATATGGCGGAGACATCGGAATTATCACCCAAAGCTCTCACTGATGAAACAGGTGACTCGACGGATCAGGAATACGAGATAACTGCCGACATGATGGTtcatgatgttgatgatgaagCAACTATGGACGAAGAAGAACTTTTAGCTGACAAAGAGGAATTTAATGAAGATGAACTGTCAGAACTACAGAAGGAACAAGATATGCCACTGGAAGAACTGTTGGCTCTTTATGGTTACTCTGACAAAGACAATCCTGAAGCTGATGTTCCCTTGGATGAAATAAAGCCTGACCCGTTGCCACCGTTGATAGATGCCAGTGAGATGGATTCACCGCATCCAATACATCCCTTGATTGAAGAAAACATCTTACCAGAAAACACAGATTCCCCGGCTCCTCCTTCTTTAGACTCCCCCCTGTCTGTGCCATCACCAGGGTCCCCTAGGTCTCCGCCGTCACCAAGAGTTAGTCGAGATAACAACTTCTTTCCAGAAAACCAGCGAATTACGAGAGGATTGGCTGCGGCCTATAGTTATTTTAATTTGGGTGAAAGTTCATCGTCTTCAGATGATGAAGATTACTCTCCAGAGGATTGGAAAAAGGAGATTCAAATTGGATCTGATCACCAGGCAGATGTTCCAGAGACAATGGGCCCAAATTACGAAGATGATCCCTACTCAAAAGATGACAAATGCCTCTGGGACCCCAAGAAAGTCAGCGGAAAAGAATTGCAGCGATATTTGAACTCAATTTGCCACATACCTGGTCTGGAGGGAGTAAGGAGAGATGTTCTTAGAGATGATGAGCAGGCACTCTACTTGCTTTTACAATGTAACTACTTGGTAGAAGAAGCAATTGGAAAGAGAAAGTCACAGGCCAACCCACAAGCAGAAATGGCCTTGTGGTCTGAAGATGAATGCAGGGACTTTGAAAGTGGTCTGAGAGTGTATGGAAAGGACTTCagacaaattcaaaagaacaagGTGATATCACGGACTGTGGGAGAAATAGTCCAGTTCTACTATTTATGGAAGAAAACTGAAAGACATGATGCCTTCGCTTGCCAGACCCGtttaaccaagaaaaaatatGCATTTCACCCTGGAATCACGGATTACATGGACAGGTTTCTGGATGAAAACGAAAGTGCTGCCTCTAGTAGGGCCTCCAGTCCACACAACTTTGCCTCGCGAGTGAGACCAGGGAACGGAATAACTCCCGTCTCCGTCCAGACTCAGAGTCAGCCAATAGCAACGCAACCAATGCATACTGTAGCCGCACCGACAGCCGCACAGACCACAGTCGTCACGGTCAATGTTTCTAACACCAACCCAGTGACAGTTTCTTTGACACGCCAGGACGCTTCGGAGAGCATCACCAACCGGCATCTGATGCAACAGTCGTGTGTACCAACGTCTGTCATAGTGTCAAGCACAGACTCTGGTGGTGAACCACCGTCCAAAAAGTTAAAGATACTTCCAAGTGGAAGACCCAAGTTAATCAACAGTATGTTGAGTAAACCTCCACCACTGAAGCCAATTGCATCGTCAGGATCGCCAGCATTTCATGCAACTAACTTGGGTAACACACCATTGTTATCAAACAGCGTATCAAATTTTAGCACGCCTAGCTCACACGAACACTCTTATTTACCAGTGCATAGCACATCTGCTTCTGATTCCGTTCTTTTTCCACAGCACAAGTGACTAAATCCTCTTTTGGAGGGGAATTATGTATGTTACGACTAACACAAACCTAACCTTGAAAGATttacttgaaataaacaaagcTTAGGTTAAATACCAAACATATATTTACCTTAAGTTGcttctctagattttacttttttaatatgCCTCATAAGTTATgtacattaattaaccctttgatgtccaaatcggctgaaaccggccagacttggtGTTTTACTCTGTtgaacgccagatgattttactcgtcaatggggaacccctgggcgtcaatgggttaagagaaAGATGCTGGCAAAAATTTGTCCCATACCCAAGGCAGTGAGAGGCATGGCCCTATTCCTTTGATTACTTTATAAACTACTTTGTATTGCAATTTTGAAAGAACTGTAGCAATGACTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7T105	Mesoderm induction early response protein 1 OS=Xenopus laevis OX=8355 GN=mier1 PE=2 SV=1
Q8N108	Mesoderm induction early response protein 1 OS=Homo sapiens OX=9606 GN=MIER1 PE=1 SV=2
Q5REE1	Mesoderm induction early response protein 1 OS=Pongo abelii OX=9601 GN=MIER1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006880 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01448 all species →	ELM2	ELM2 domain	Family	Interproscan
PF19426 all species →	MIER1_3_C	Mesoderm induction early response protein 1/3 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR000949 all species →	Domain	ELM2 domain	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR045787 all species →	Domain	Mesoderm induction early response protein 1/3, C-terminal	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR040138 all species →	Family	Mesoderm induction early response protein/metastasis-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10865 all species →	METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0016575 all species →	Biological Process	obsolete histone deacetylation	Interproscan
GO:0042826 all species →	Molecular Function	histone deacetylase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000012709.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.