Gene detail

Detailed information of ENSTIFP00000013496.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029199216.1, transcription factor AP-2-alpha-like isoform X1 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000014472

TAGCGCAAGCTAAACACAACATACCGTGACTGGCTAACGCTTTTCGCCGCCGACTGGTAGAGAGCCCCGGGTTATAAAACATTTAGCGCCGGCCGGGAATTAAGTTTAATTATGACGTCCCAGATAGGCCCTTTGGGATCAAACAATTCAAGTCAAGCAGCACATAGACAGTCAGGTACGAAGAGAAAGAGATCGCAAACCCGTGACTTGTCGCCTCCGTTAACTCCTCTATCTCCATCGTCATCTCATTCAAAACGAagcgaaacttcaacatccgcCTTCGAGCTGATAGAATCCGAGGATCGTGTCCTTGGGCTGCATGGCGTTAGTACAGTTAGTGCTGTGTCTTCTTCGCCTACAGCAAATGTCACTACGTCAGGAATAGCATCGTGTGGCGCACCTCGATTATCTCATACGCCTCCTCACGATTTTCGTGAGGTCCTCGCCTCTCCGATGCAGCCACAACCTCACCAATATTACGCGCCACAGTACAATCCGTTACATTTCCCTCAGCAACAACAACCGCGGTTTGATTTTACTCACCCACTAGAGCCATTTCAGGCAGCCCATTCGCAGCAGTTCGGCAATGCTCCTGCAGCTTTTCACCCATCTAGCGGGGCGCCACATCAGTCAATGGCCAGTTCAACTCACCCGCAGTCAGCCTCGCAACATCAAGCTCGCCATCCATTGCGAGCGCGTCCTTCCGACGTTGAAGCACTACAACAAGTTCACATTAACCAGTTTGCCGGAGCAGCTATGGAGCACGCGCGACGAAGAGAAGAACAACTCTACTCGACCGTTCGAAGACCCGATCATATGTTTGATATGATAGCTCCGGGGAGTTTAGCAGACACGCAGAATCATCGGTCTGGGCTAAGCAGCAAGAACGGAGATGCCCATAACCACCATCACAGTCCGCGTGAAAgtCACAAGAAAAATCACACCGAGCGTGATTCTCGCGAGGAGGGTGATTCGGATAGCCCCGTGCATCCTTCGGACGTGTTCTGTTGCGTTCCTGGAAGATTGTCCCTCCTTAGTTCTACCTCAAAGTACAAAGTTACCGTCGGGGAAATCCGAAGGCGGCTCTCTCATCCCGAGTGTCTTAATGCTTCGTTACTGGGCGGGGTTCTAAGAAGGGCCAAGTctaaaaatggcgggaaaagcCTGCGTGACAAGTTAGAAAAAATTGGTCTGTCACTTCCAGCGGGGAGAAGAAAGGCAGCACAAGTCACGTTGCTGACTTCATTAGTGGAAGGAGAGGCCGCTCATTTAGCTGCAGACTTTGATTACGTATGCGAGTCTGAATTTCCCGCCGCCCAACTCGCCGAGAGGCAGTATCGACAATGCTCTGAACCATCGCAACAACAGTCAAGAAAAAACGCAATTCTTGCAGCAAAACAATTGACAAAAGAACTTCAAGATGTTCTTGCACAAGATCCCTATCCAAAGTCCAGGCTACCCAATAGTAACTTACCGGACCCTATCTTACGAAGCCTAAACCAGTTTGGACTTGTTACCCACGGGTTTGGTTCACCGGCAATAAATGCCGCTATGAATGCTTTTCAGGCCTACTTAGGAGAACTACTCAAATTCCACGAAGGAAATGCCACTCCAAGCAATAATACGGGAAGTAGAAACcaaaatattgtaaaaaatgGGGAGGCTTGAGTTGTAGTTAATATCAACCACTGTATAGCTTAAAACAAAACTTGAACCAAAGAAAATTTGTACTCATAGATAGTGCATTCCATTACAGATCGAGTGACTTCCAAAGTCCCTGTCTCCGGACTATAAACATGTATAGAATATATTATAATCAAAGGAAAACGACAAATAAATTCGCTACTTTCTCTTTCCAGTACGATACAGCATGTTAAGTACGAAAGAAACGCTGGCTGCGCACACCTGATGTATCTCATGGAATGTACCAATATGATTGAGGGAATATAATATTGTAAGATGGTGTTTCAAGGAGCTGTTTATCTTCTCTGCGTTTCTTGATTCTCAAAATTTTGAATTCAATTAGCATTGCTCCCATGTACGCTATTTATTTATGACATTGCGAGGAACGCCGGCGTCATCTCAATCAAAGTAGCTTCTCTTCGGCTGTTAATTGGCCTTTCGCGAGGTAATTCATAGGATACTTTAATCGCTCCAAGATGGACAACGCCAGCGAAATTAACTCTTACTAAGGCTCGTTTTAGAGTAAGTGACAATGAACTTAAAGAACTGGGACGGGTGCCGAAATTTTCGTTCGGTCAAAAGCACAACTCGTACGTGCAATGCTATTGTTCAGGTTATTTTAAGTAGTATTTTCGTTGGCGTTGTGTTCGCAAAAGCGTGCGAATTTCATTCAAGATGAAGTCCTAACTTAGACGCTGCAGACTTTGTCTTAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P58197	Transcription factor AP-2-alpha OS=Rattus norvegicus OX=10116 GN=Tfap2a PE=1 SV=1
P34056	Transcription factor AP-2-alpha OS=Mus musculus OX=10090 GN=Tfap2a PE=1 SV=2
A1A4R9	Transcription factor AP-2-alpha OS=Bos taurus OX=9913 GN=TFAP2A PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004315 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03299 all species →	TF_AP-2	Transcription factor AP-2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013854 all species →	Domain	Transcription factor AP-2, C-terminal	Interproscan
IPR004979 all species →	Family	Transcription factor AP-2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10812 all species →	TRANSCRIPTION FACTOR AP-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0042127 all species →	Biological Process	regulation of cell population proliferation	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000013496.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.