Gene detail

Detailed information of ENSTIFP00000013609.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_015776621.1, PREDICTED: LOW QUALITY PROTEIN: dermatan-sulfate epimerase-like protein [Acropora digitifera]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000014592

ATGTTCTTAGTTAATTGGATTATACTGATCCTTCTGTTCAACTTCGTTCAAATATCACGAGAACGAGCAGTCCACCCTAACCTCTATTTTTCGCCGAATGAAGTCAATCGCTTGCGACAGCAGGCAAAGACAACTCATCGGGAGATTTTCGCTGGCATAGCAGAAGCTGCTGAGTATATAAAAGCACAGCCTTTAAGATATCTGCCACCGAGAGACTGGTTTAAATTTTCTAGTAGATGGAACGAAGACCATGGGAATAACTTTGGAGCTTTAGCTATGTACTGTGTGTTGAACCACACTGACATTAAAGCTAGAAATATTGCTTTGCAATTTTTTGACAACTTCGTCTCCTTACCAAACTGGCGTGTTAGGGCGAACATGGTGGACGACGTACCTGTGGCACATAGCTTGGTTGGCGTAGCAACGGCCTATGATTTTCTTTACGAACACCTCGATGTTGGTTTGAAAGAGAAAACTTTCACGAAGATTGCAAATGTCACCAAGGAGCTTTACGAAAGGTCCTTTAAGCTTTCCTGGGGTTCACAGTACATCCAAAATCACGTTGCTACTAATTATGTAGCCTTGTTAATAGGAGCATTGGTCGTTGAGCAAGAATTCGAAGAAGCAAAGATTTGGAAAGCACGAGCACATCGTATGCTTCATCGTACCATGTTTCTTCTTAATCTTGTCAAGGATGGTTCTATGGAAGAAGGAGTAGCGTATGGTTCTTACACTTCAAGGTCTCTGACTCAGTATATTTTCCTGGCTAACCGACACCTTGGAATTGACTTGACGAACAACAACTGGTTGGCAGAACACTTCTGGTTCATGTATCGTACGATTCTTCCAGGATTCACCGAGACTGTTGGCATTGCAGATTCAAACTCCAATTGGTTCTACGGACCCGAGAGCCAGCTCGTTTTCTTGGATAATTACGTCATGAGAAACGGCTACGGAAACTGGCTTGCGGGTCGAATCCGAAGAATGCGATTAAAGATCGCTAAATTGCCTGCTTCCCATCGTTATTGCACGCTCCATACCGAGTTCATCTTCTACAACGCAAGTATTCCAGAAACCGAACCTCCGAATGCAACAACTCCGCAGCTTCATGTTTTCAAGGACTGGGGAGTCGTGACATACGGAGGCGGAGCGTTAGATAAGGACGGAGGAAAGCATACATTTCTATCGTTTAAGACGAGCGTATTGCACGGAAGAGCGATGAACAACATTTTCAGACACAAACCTCTGACGTGGATTGAAGGGTGGCGTAATTTCAACCCAGGCCACGAGCATCCAGACCAAGGATCCTTTGTATTTGCGCCCCATGGTGTCCCTTTCATCACTGAGGCACTCTACGGCCCGAAATACACATGGCTGAATAATGCGCTTCTATTTGGTCCAGCAACGATTCCCAGTTGTTCCGAATCTCATGAAGGACAAATTGGAGACTGTAAGCAGTGGATGGTTTACAAAAACGAGTCCACGTGGTTTGCTGATGCTGAACTTACCGCTGCTTCGGAGAAAGATGAAGTTGTTTTTGCAAGTGGAGAGTATTCGGGGTGGTACAGATCTTCTTTGGGTCTGAAAAGTGTTTACCGTGCTGTTGTATTGTTAAACCCAGGGGTTCTTCTGGTTGTTGACCATATTGAGACCATTGCAGAAAGCTCAACTCGTTACGTGAGTGCGTTTTTCCATAACAGATACAATCCTTTCGTCTTGAAAAAAGACAAGTATGGAGAAACGTTGGCTTCCATCATGCTAGAAGGCCACCCTTACCACGTCCTCTCATTCAACGGTCATCAGGAATACAGCGAAGTCCAATCACAAAGTACAAAGTATCCTTCAGAGGCTGGGATACGAGAGACTCATTTCCTCAACATAACGACAATTTTAAATCCAAAGCAAACCAGATTAGggtatttgtttgtttcaccCGGAAATAGTGTAACAAAACTTCATCTTGAAGGAGAAGAAACCGGAGTACATGCGCATTTAAACATAAATGGCCTTCAACACCAGGTATCTATCGCTACAAACTTTAAAAAGCTTTTTGAGTTTCTTGGAGGTGATGGAATCGCAAAGGttgtaataaaaaatacaaagcaaacgATTGTGTTTGGAAGAGTAGATCAAGTTCTACGCATCTCCGAGGAACGTGCTCATGAAGTTTATTTGCCAGAGATTTATATTGGCCTCTTTGCCTTGATTATTGGATTGGTTACCTGTCTCTGTCGCCAACGATCACACCGACGTTTGTTTATCTGCAACCAGCGAGTGCGCGTGTATTTCGTGGGTGGATTGATAATAACATGGTTATTTATAACATGGTGGATAAGAAAACTATATCAATAA

Transcript

ENSTIFT00000014592

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZU8	Dermatan-sulfate epimerase-like protein OS=Homo sapiens OX=9606 GN=DSEL PE=1 SV=2
Q0VBN2	Dermatan-sulfate epimerase-like protein OS=Mus musculus OX=10090 GN=Dsel PE=2 SV=1
P0C2H4	Dermatan-sulfate epimerase OS=Bos taurus OX=9913 GN=DSE PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002542 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16332 all species →	DUF4962	Domain of unknown function (DUF4962)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008929 all species →	Homologous_superfamily	Chondroitin AC/alginate lyase	Interproscan
IPR032518 all species →	Domain	Heparinase II, N-terminal	Interproscan
IPR052447 all species →	Family	Dermatan-Sulfate Isomerase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15532 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030204 all species →	Biological Process	chondroitin sulfate metabolic process	Interproscan
GO:0030205 all species →	Biological Process	dermatan sulfate metabolic process	Interproscan
GO:0047757 all species →	Molecular Function	chondroitin-glucuronate 5-epimerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01794	DSE; chondroitin-glucuronate 5-epimerase	EC:5.1.3.19	Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate	ko00532	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.