Gene detail

Detailed information of ENSTIFP00000014031.1 in Montipora efflorescens

Genomic Location: :...
NR annotation: KXJ05089.1, RNA-directed DNA polymerase from mobile element jockey, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSTIFT00000015051

ATGTATAAGGAGAAGTGCCTGGCCTATAGGGATGCTCTTGACCAAGCGAAAGCAAATTACTACAGCAATAAGATCAGGGACTCGGACACAAATGGATTATTCCGTATAATTGATGGGCTTTTCAAAGTCAAAGCTATCTCTCCACTTCCAACTCATGACTCTGTTTTAGATCTTGCTGAGTCAATCAGTAGCTACTTTAACGAGAAGATCCTCAAACTACGAGATACATTATCTAGTCGTACAGAATTGACTCATTTGTTGACTAAGGAGCCACCATTTAGTAGCTCAttcatgaaatttgaaactgtGTCGGAGAAGTCTATTCGTGACCTTGTGCTGAAATCTCCAACTAAGTCTTGCAGCCTGGATCCAATTCCCACGGGTATCCTGAAGGAACACGTTGATTTACTGGCCACTCCTATTACCAACATTATCAATGAGTCTTTTAGCTCTGACGTTTTCCCAGACTCACTTAAAGAAGGAGTTGTTTTTCCATCTTTCAGAAAGTCTTGTACTGACTGGGAGGCCTTTGCATCCTATAGGCCCATCACCAACATTTCCTTCTTGTCCAAGCTGCTCGAACGAGCAGCTGCCATTCAGACTAAGAACTACCTAACAGCAGAAGGTCTGCTTGCAAAATGGCAGTCTGCCTACAGACAACATCACAGCACAGAGACAGCACTTCTGAGGGTTGTAAACGACATCCTTCTTTCCATTGATGCTAGGAAGGAGGTGGTCTTAGTAATGTTGGACTTATCATCAGCCTTCGATACTATAGACCACACCCTGTTACTTGAGCGGCTGCGCAACTACTACGGTTTCCAGGACAAGGTGCTGATGTGGTTTACATCTTATCTAATGGGTCGCTCTCAGTCAGTCGTAGTTAAGCAGTTGCATTCATCAAGCAAGTGTTTAGCATTTGGCGTTCCCCAAGGCTCCGTCCTGGGCCCACTGTTGTTCTCACTCTATTTTGCCCCACTGGAGAAAGTGATCCACAACCACGATCTGGCTTGTATGATGTATGCAGACGATACCCAGTTGTATCTGACCATCAGCCCTAACCACGACCCCACAACTTCCTTGCTAAAGCTCGAACAATGTATCAAAGATGTTATTAACTGGTGCTCAGCCAATGCTTTAGTGTGTAATCCATCTAAGACCGAGGTGGTTCATTTCTGTTCTCGGTTCACTGAAGCCAGGGAGGATATTGGATCAATAAGCATTAATGGGACAAAAGTGATACCTGTTAGTTCTGCTCGAAATCTAGGCGTAGTTTTTGACAAGTTTCTTGATTTCTCATCTCACATAAACGCAATTTGTAAATCAGCTACATTTTCCATTCGGAACATAGGCAGGCTACGCAAATACCTAAATCAAGCAGATACAGAAAGACTTGTACATGCTTTCGTTACGTCCAAGCTAGATAGTTGTAATAGCATACTTTTTGGTTTACCATCTTATCAAATAGAGAAATTACAACGGGTCCAGAACTCCGCGGCCCGGCTTGTTACTAGAACAAAGAAATCAGAaGCCTACAGTATGTTGGAAGAGGCTGCCTTTCTTCATAATTTCACCAAGGCTCAAGAACTAGTGGCATTAGCATATTTATTTGGTGATCATTTACCTCGTAATATTTCCAAAGCAGTCAACATGTTGCATGAAATCGCTGGAAAAGGATCTGCAGTTGGACAGCAGACTCTTGGTTTCTTGTATGCCACTGGAATTGGTGTGAACTCAAGTCAAGCCAAAGCATTGGTTTACTACATGTTTAGTGCTCTTGGAGGAGATGTTAAAGCCCAGATGGCTTTGGTAGGAGAACAAATATTTTGGTCATTGCACACAGTTTTTCATGAAATACTGGATTTTATTGTAGTTGCTGAAGATGTTTTGCTAACTGGTGGAGGTGCTGTGCAGAGGATACGACTAATAGATGAGGAAGAACAGGGAGGAAACAGTGCCGTTCTAGATGAGGACCTTATTCAGTACTACCAGTTCCTTGCAGACAAAGGAGATGTTCAAGCGCAGGTTGGGCTTGGACAGTTACATTATCAGGGAGGTCGTGGAGTGGAAATGAATCATGGTAGAGCCTTCAGATACCTTCAACAAGCTGCTGAAGCAGGAAATGCAAATGCTATGGCTTATTTGGGAAAAatgtATTCTGAGGGTAGCGCAGCAGTCAAACAAGACAACAAGACAgcatttgattggttcaaaaaggCAGCAGATTCTGGCAATGCAATTGGTCAAAGTGGCCTGGGCTTGATGTATATGTTTGGCAAAGGAGTTGAGAAGAATTATGAGAAAGCTTTTCAGTacttcaagatggctgccgaacAAGGTTGGGTTGATGGACATCTGCAGATGGGCACCATGTATTACCATGGTCTTGGTGTGAGGCGGGATTACAAGATGGCCATCAAGTTTTTCAATTTGGCATCGCAGACTGGTCACGTGTTAGCTTTTTACAATCTGGCTGTTATGCATGCATCCGGAACTGGTGTCTTGAGGTCGTGTAATACCGCATCGGAGGTACGGGATCCTGCAATTTTAAGTACGATTTTCACCAGCGATGAAAGCACAAGCAGAAACAAAGTACGGCAATTCAGTAATACAGCTGCCCGAGTGAAAGTAGGTGATTATCATTACTATGGCTATGGCACAGAGATAGATTATGAAACAGCTGCCTACCACTACAGACTGGCATCTGAACAACAGCACAATGCACAGGCCATGTTCAACCTTGGCTATATGCACGAGCGAGGACTAGGCATGAGACAGGATATTCACCTTGCTAAAAGATTCTACGACATGGCAGCGCAAACAAGCCCTGATGCCCAAACCCCCGTCTCACTAGCTCTGATGAAACTTGGTGTGTTCTTCATGTGGGAATGGCTCCAAGAGaaatccttcgtttttacggagaattcgcattaa

Transcript

ENSTIFT00000015051

Protein

Uniprot

Uniprot term	Description
Q80Z70	Protein sel-1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Sel1l PE=1 SV=2
Q9ESM7	Protein sel-1 homolog 1 OS=Mesocricetus auratus OX=10036 GN=Sel1l PE=2 SV=1
Q9Z2G6	Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF08238	Sel1	Sel1 repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050767	Family	Sel1/AlgK	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11102	SEL-1-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0036503	Biological Process	ERAD pathway	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14026	SEL1, SEL1L; SEL1 protein	-	Protein processing in endoplasmic reticulum	ko04141	deepkoala