Gene detail

Detailed information of ENSTIFP00000014195.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029202188.2, transcriptional regulator Myc-like isoform X1 [Acropora millepora]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000015227

TGTTCCCGCGCTTCCGATTATAGattcaaaacagaatttcctcCTCGCTAAAGCGTGGGACTCGAGTGCGTAGGAGGCTAGTTTAGTGCCCAAGCCGCCGCATTGTGTGTGGTCTTCAATGAATGGCTTTGAATTGCCGTGAAGTGTAAAACTTTTCACATTTGGTCGTTGAGCGCACTAGCGATCGTGTCGGAGTGTAACTGGTTATTAAAACCAGATTCTAAACTTCGACAAAGCGTACACGGCGCAATATTAAGTCAGTGCCAGAGTTATCTTAAACGAGTGTCTGAGGGACTAACATGGTCGAGGACAACCTTATTCTAGAAAGCTTCGGCAATGACTTCGATGCACTGCAACCATCTCTATTCAAAGATTTAGGCGATGATTCAGCAGCCTTGAAGAGTAAGGGCAAAGAAGCAACTGATGACCTCTggaaaaatttttcatttccgCCAACGCCACCCATCTCACCGGCTTGTTCCCCGCCGTACGCCACAACGGATGAAGCAAGAGAGCAGCCAATTTGTCTTGGAATCGCGGACGAAGGACTCTCTCTAGACGATGAGTGTTCTCTGTATTTCCAATCCAGTGACCTCAAGGATATATTGATCAAAGACTGCATGTGGAATGGAGCGGCCTTCGAGAAATCAGTCGACAGGAAACAACAACGAATTCATTCAAAAATGGAACGTGTTCGACTCTTATCTCAAACACCGCCTCTTAGTGAATCTGCGGCAAGAATTTTGAGTGTAGATCCTTCGGAGATTTTTCCCTTTCCTCTGAGCATAAGCCCCGGCAGTGAGCTTGGTGCGGAAAACATGGATGACCAGTCGGATTCTGAAGAGGAAGAGGTCGAAGTTGATGTCGTTACTATAGAGAACTCAAAGCGAGAGCAGAAAACTGAAGAAATCGTAGAGCTTGATTGTGAGAAAACTTGCGAAACAATGCCATCCGAAACTTCATTGAATGAACCGTCTTCTGAACTCTCAAGCGTTGAAGACAAACAAGACTTCCCTGACAACGAGAAATCGGACTTTGTCGCCAAAATGCGAACACGTCGACACAGGAAAGCTCTATCAAGCGAGGGGTTGCATTGCAGGGAAGGACGAAAGGTAGCTAAAGCCATTAGCAGTTCTGGAGAAAGCGACGAATCGGAGAATGACAGTGAGTTCACGCGTGCAACTCACAACGTATTGGAAAGGAAGCGAAGAAACgacttgaaattgaaatttcaaaagttgCGGGACTGTGTGCCGGAACTCAAGGACAACGAGCGAGCGCCGAAAGTCTCAATACTAAGAAAATCGTGGGAATATATTAGCCACATAAAGCAAGAAGAAATAAAACTGGTCGCGGAgttggaaaaacaaaagaaaattaacgcaaCGTTACTAAGAAAGCTTCTGGCTTTGAATCAAGCGAACTAGACAATTCTGGAACTTTcgttattttcctttgttctctcCCCACAGGTAATTCTTTTTTGTAAGTTCCCAATTGGGAGAAAAACTGTTTTGAAAATGTTCATTTATTTTctcattcatttattttcacTCGCACTTCGGAGTTCAatttattgacaatgaattaaatttttctGATCACGGCACAAAATTCCTGATGCTAGTTTTCAGAAGTATTATATTGAGAAGACTCTTTAGTCTTAGCTGTAGTGAAATCTCTAAGTTGTGCATAGGCGTACAGTTAATCTTGAAGATACTGGTTGTAAATAGGGCTTTTACGGTGCTGTTGCACTCCCATTCGAATTGAAACCGGCTTTGTGAATGCTTGACAAAGGCATTAAAAATGATCGGCGTAGAATTACAAAGAATAGTTTGAACCATTTGGGGTAGGAAACTGTAATAAAATAACGACGGAAAATCGAATAGTGCTTCGCAAGTGTTTATTAAATGACGAAGGAGACAACGCCACAATATGTTCACATTTTGCTCAGAGAAAACGAAAACGGTGGAGGTGGTCAAATTTACACGCGTTACGCTCCCATTCAAACGCGATGACATTCTTCAAATGAATGGACTACAAATTTGCATGTGTGTGTTGACTTAAACTATAGACTAAACTGCATAAATTACAAACCCATTAGCGTATGACCTGTCTCGTGTCataatgaatgaaaattgttggGAAATACAAAATAATCAACTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P10395	Viral myc transforming protein OS=Avian myelocytomatosis virus CMII OX=11869 GN=MYC PE=3 SV=2
P01110	Viral myc transforming protein OS=Avian myelocytomatosis virus 29 OX=11868 GN=MYC PE=3 SV=2
Q90341	Transcriptional regulator Myc-1 OS=Cyprinus carpio OX=7962 GN=myca PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002214 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF01056 all species →	Myc_N	Myc amino-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002418 all species →	Family	Transcription regulator Myc	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR050433 all species →	Family	Myc family transcription factors	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR012682 all species →	Domain	Transcription regulator Myc, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45851 all species →	MYC PROTO-ONCOGENE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000014195.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.