Gene detail

Detailed information of ENSTIFP00000015294.1 in Montipora efflorescens

Genomic Location: BLFP01001323.1:1806607...1811383
NR annotation: XP_029201889.2, neutral and basic amino acid transport protein rBAT-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSTIFT00000016415

GCCTAATCAATTTTGCCGCGTGGAGTTTTCGTTTTGTCTGTCAGTCTATTTCGGTAGTGATCATAGTTCTTATCGCTTCTGTTTTCTAGCCGCTCTTTCAGAATGTCGAACGAAGTGGCGTTTAACAGTTTAGAGAAGGACGATGTTAAGATCACGTTCAATGAAGGATCGAGTGATCTTGGAAAGCCAACTGAAGAAGAAGTGGCACAACACAAAAGGACACGTTTGGTCCTCGTGGTCCTGTTTGGTATCATAGTTTTGGCGATGGTTGTTGCAGcggttatcattatcattgtttcTCCGGCATGCAAACAGAAAAAAGGTCTAAAGTCAAACGAGCGTGAAAAAGGAAACGAGACGACCGATGAAAAAGGAAACGAGACGACCGATGAAAAAGGAAACGAGACGACCGATGATTTGTGGTGGAAGCGCGCTGTGATGTACCAAATCTATCCTCGATCGTTTTTCGACAGTAATGACGACGGGAATGGTGATTTGAGCGGTATTTCTAAGAAACTAGAATACTTCAGTGGGCTGGGAGTGAACGCTTTTTTGCTTAATCCGATCTACGATCCGAAAGATTTCATGGCGATCGAGAAAACATTGGGATCAATGAAGGACTTCGAGACCTTTGTCAACGAAAGTCACAATAAGGGCTTCAAAGTTATTCTGGATTTCGTCCCTAATCACACTTCAAAACAGCATCCCTGGTTCGTGGAGAGCAGCAAAGACAAAACTGGCCCCAAGAACGACTGGTACATTTGGGCAGATGCTGCTGGTGTTGGAGGAAATGGTACTAACCCTCCGAACAACTGGGTTAGTGAGGACGGTGGAAGCGCATGGGAATACGAAAACAGCAGCAGACAACAATTTTACCTTCATCAGTTTAAAAAAGACCAACCAGATTTGAATCTAAGGAACAGAGAAGTCATGAAGGAACTAAAGAAAGTGCTGGAGTTTTGGCTCAGTAAGGGGGTCGATGGTTTTCGAATTAAGGACGTGCAGTACTTCCTGGAGGACGCGAATCTTACGAACGAAACTAAACCTTCACCCAACACATTCAGCCGTAATTTCACATACGATCTTGAGGAGAACCGTAAAATCCTAAAAGAATTTCAAGAGGTTATCAACAATGGCAGCAAGCGTCTGCTGATCGCTGATGTTGAGGGTGCAAGATCCACACAATATTATGACCTGGCAGACATCATACAAAATGTTGGCTTGATCACAAAAGTGAATCGTTCAGGCATGACGCTTTCTCAAGGGGTTAAGAACACTGTTGTAGAATACATTGATGCTGTTCCTGCAGGCAAGGTACCTAACTGGTTGATTGGCAATATAGGCATTGCTCGTGTTGGCAGTCGTCTGGGCCACGATGTAAGGAATGCCATGAATGTTCTTCAGATGACACTCCCTGGCATTGTCACAACATACTATGGTGAAGAGATAGGCATGCTCAATGCAGTTAGTGAGAAAACACCCATGCAATGGTCAGATGAATTATATGCTGGGTTTTCAAGCCAAAGAGCCTGGATGGATGTAGCACCAAGCTACTTGACCTTAAATGTAAAGATTGAGAAGGCAAATACCAACTCATTCTACAACAATTACATAAAGCTTGCTGCCTTGAGAAAAGAACTACCTTTTGCCACTGGTGAGGTTAAAGTTGTGCAGAGTGATCCAAAGGTGTTTGCCTTCCTTCGTAGCCAAGGTGTCCTTCGCTACCTTGTTGTGATCAACTTTGGTGACAAGTGGGATGGAGATATTGCTGGTCTATCAGGCAGAGGCCTCAAAGTGTTTGATAGCGAAGAAGACACAGCTGGAACAGAGCCCGTAGATGTGAACAAGCTCACACTTAATCCTGGTCAGGCAGTGATTGTCAATGGCACCAGTGAACACTGGTTCTTGTCTTAAACCAAAACTGACATAAAATATCAAACCTTGGATTTTTGGTACTTCAACCTAATAATGTTGGGACCAAAGCATTGTGTCAAATGTATCATTAGCCCAGCTTCAGTATTATCAGGTTTTAGTTGTgagataataatatttaaaaatccATGTAGAAAATTCAGGGTTTAATTCCAAGTCTGCATTGCTTCATTTAGAGAGAAATGTAGCATGATAAAATAAAACTGAtggtagggttaggttaggaaTTCAAGTGGGGCAAGATCTTCTTTGAACGTCTACTCAGTCATTATattatgaggaaaaataagGTTAAAACTGTGATTTCTTTAGGTTTCACACTTTTTATGTTGATATGAGTCAAGAAATACGTGCGATCAAGTCTTATCTGACCTTTATATCTGCTTAGCCAAAGGAAAaccattaatttaattttagcaCAGGAAAAATACAATCTTGTTATTTTAGACTAGTATTCACAAGAAagcaaatttgaaacttgggTGTAATAATTAAGTTATACACAATGTGACACTGTTGTGATGGGTATAGTCACAGTCAAACGCTTATATCAATGGCCATCCGCTTGAAATGTGTACAACAGCGGCCTCTTTAAGGGTTTGATGGAAAGCACTGGAATGTACTATTTCTCCACAGTTTCATCTCCTGTTTACTGTCTAAAGCGGCTAAAAACAAAGTGGTAACAGTTATTCTAAACAGGTGACCGCTCTACGAGTTTTTTTCTACTCAGTCATCAACAGGACTAAACTCTAACCAGGAGCTAAATCAATCTATAGTCTTTGAACCACGTCGCTCTGACGAGCTCCTGTTAATCTCTTCAAACTTCATTTTCTCttcagaaaattaaaatattgttaTGTTTACATAGatgttgtttttccttttgtggTTATTTACTTTGTACGCTGTGTGACTTGAGTTAAAAATATTATCTGCTGCCCTCCCGCCGCGTTAGTAATAAAAACTACCTTGTAATTGTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q64319	Amino acid transporter heavy chain SLC3A1 OS=Rattus norvegicus OX=10116 GN=Slc3a1 PE=1 SV=1
Q91WV7	Amino acid transporter heavy chain SLC3A1 OS=Mus musculus OX=10090 GN=Slc3a1 PE=1 SV=1
Q95WY5	Alpha-glucosidase OS=Culex pipiens OX=7175 GN=CPM1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003162 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16028 all species →	SLC3A2_N	Solute carrier family 3 member 2 N-terminus	Family	Interproscan
PF00128 all species →	Alpha-amylase	Alpha amylase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031984 all species →	Domain	Solute carrier family 3 member 2, N-terminal domain	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR006047 all species →	Domain	Glycosyl hydrolase, family 13, catalytic domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR045857 all species →	Homologous_superfamily	Oligo-1,6-glucosidase, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10357 all species →	ALPHA-AMYLASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14210	SLC3A1, RBAT; solute carrier family 3 (neutral and basic amino acid transporter), member 1	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.