Gene detail

Detailed information of ENSTIFP00000016737.1 in Montipora efflorescens

Genomic Location: BLFP01001640.1:4492526...4514131
NR annotation: XP_044183085.1, fibronectin type III domain-containing protein-like isoform X2 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTIFT00000017947

GACCCGCCTCCACAGATTACCTTTTTGTCCAATGACCTTGTTAAACCTGGAGAAGTGAAAGGGTTCTTCAAGCTGCGTTGTAATGCCACTGGAAAAAATCTGAAATGGAGCTGGAAGTTCAACGGGGGAGATCTTCCGTACCGAGTAAAAAGTAAAGGTAATATGTTGGTGGGGGAATTCCCGCTGGGTATGGCAGAAAGCGGAAAGTATCAGTGTTTTGTTGAAGATACTGTCAGCAAGGTCAAGACCTTTAGCAGAGAGGTAGAAATCAAGGTGACAGTGGTTGGTCGCTTCAATAATGAGGACGATATGAGAGAAGACGTTCGTCTCGGTCAACCTCTCGTCAAGAACTGCCCAAACCACTCACAAAGCTTCGGTGTGACCTACTCGTGGGAAGGCAAGAAAAACAAGGTGCAATTGGAGAGAAATGAAAGGAGAGCAATTTCGCCTACAGGACGACTAGTCATTACATCCATCACCCAAGAGGACATAAACTTCATTGAAACCCAACTTGGAATACGGTGTAAAATTTCCGCCATAAATACGTACTATGAATCTGGGGTGTTAACTCTAAACAAAGTAAATACCCAAGCTACCTCTGGTCCGCCAAGATGGGGCGCAAAACCTGGTGCAAAAGAACTGGTCATCGAAGGAAGACGAAAGGAACTGTATTGCGTAGCTCTTGTTATTCCAAAATGGAAGACTGGACCCCCTAAAAGCAAGGTTGACGTTAGAATTCATGGTAGTAAAACTCTAACTTGTGATGCAGTCGCAGATCCCGCACCAAGGTACTCTTGGTACAGGGACGGAAATGAAATAACTACATCAACCTTAAATGACGGAAAAATTAAAGTGGAAAATAACAAGTTGCATTTTAAAGGCATCACGTTGGGAGAGGATGGAATTTATCAGTGTGTTGCAAGAAACGACATTGGAATGATCGTGTCGTCAACTTGGGTGCATGCGCCTTCTTTCgagaaaaatggttttggtccTTTCTATTTATTCAACGGCAGCAATGGACGACTGGAATGCGTTCCAGAGGCTGCTCCTCGACCAACCGAATTCAGGTGGTCCAAAGACGGAGGTCCAGAGCTGTCTGGCGGACGTTACACCGTGGAAAAGAATGGTACCTTGGTGATCGACAAGATCGATTCCGATGATGCTGGTGAATATAAATGCTCCGTTAAAAATCTTCTTGGTAGCGCCGCGGCCACGGCAAATGCAACAATTTATACGGGGACAAGCATTGTTATTGCACCCAAGAGCAGGAAGGTAGAAAAAGCAACCCGCCTTGATCTTCGATGCGAGGCAGAAGCTGACCCGAGGCTAACAGTCAAATATAACTGGACAAAAGACGGTTCTCCCTTGGAGTATCAGGGGAACATTGAATGGCGAGAGTCGCAAAACGTCCTGATAATTGCTGACACTACAGTCTTTGACTCTGGCATTTATACTTGCGTTGCCTTCACACCTGAACCTCAAAAGTCCAAGGTCATGGCATCGGCTACCATCGATATCacagGTGTTCCTGATCCTCCGACAAACCTTACGTTATCTCCGAACTGTGGTAATCGTACGACAACTATCTCGTGGGAGCCTGGTGCACCCAACGATGCTGCGATCACACACTTCTTGATTGAGCAGAAAGCTTCTTTTTCCGATTTTCCTGACAGCCCGTTCGAAGTGATTGAAAATGTCACAGACCCCAACGCTAAGTCGTATTCTCTCGATCTCCCTGGAGCAGCAACACTCTACTTCCGAATGCGAGCGGTGAATAGTTTTGGACCGAGCCGTGCCAGTTTTCAAACGACTCGTCTCTGCAGAACAGATGGCGCAGAACCCGGGCCACCATCGGATGTGAACGTCTACGCTTTTGCGAAATTTATCCTTGTGACGTGGGAGTCACCTGTCGAACCGAACGGCATCATCATCGATTATCAAGTGGGATCCAAAGATTATGCAGACGGCTCAGAACCGAAAGATGTTGTGGTAGATAAGGAGCAAACTGGATTGGACGAGCGAAGAAAATTACTGGAGAATCAGAAACCCAATAGTAACTATATTGTAGAAATACAAGCGCAGACAAACGAAGGCTGGGGAACAAGTGCACGAGAGCTTTTGAGAACAGTGAAATGGTCAGCGCCTGCCAAGCCAAACAGTCCTACAGTCGAAGGAATTGATGTGGACAGAGTTCGAGTTAATTACAAGTTTGGTGTTGGCGGAGGGTACACGCACGAGTTCTTGGTTATGTACAGGAAGAAAGaaacgtttaaaaacacaagctGGGTAAATCATTTTGAAACGCAGAGTGTTGAGATTGGAAATCTGAGTCCGGAGTTGTACGAGTTCAAGACTGTGGCAAGGAACGACTTTCCCGATCGGGAAAATCCTGAGCAGAGTCCGTCGAGCGATGTTACTGATGGCAGGCCGTTACCAGGAATTGTCAATGCTGGAAAGCGTGCCACAACGCCAGTTCATAAAACCGCCTGGTTTATAACTCTGATGGGCATTGTCGTTCTAGTGCTTATTGGCCTTTGCATTATGATACTTTACAATCGACAGAAAGGAACCAAATATCCTGTTGGGAAACGTGAAAAAGACAGGGCAGCACTTATCGTTACAGAACCTCCAGATCAGTTAGATGCCCCCAACGATGTCAGGACTGAACATCCCCCGCCTTACAAAAGCGACAGCTCATTGCACAGGGACAGTGACCGAGACAGCTTGGATGATTATGGCGAGGGCAAGTTTAACGAAGACGGATCATTTATACAAGAATACGGTGATGAGAGAACTGAACCCCAAGGCGACAAAGACCAGTCGGCTCTCTCCACCTTTGTCTAG

Transcript

ENSTIFT00000017947

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8VIW9	Fibronectin type III domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1
P10586	Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens OX=9606 GN=PTPRF PE=1 SV=2
A2A8L5	Receptor-type tyrosine-protein phosphatase F OS=Mus musculus OX=10090 GN=Ptprf PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000435 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF13882 all species →	Bravo_FIGEY	Bravo-like intracellular region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR026966 all species →	Domain	Neurofascin/L1/NrCAM, C-terminal domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44170 all species →	PROTEIN SIDEKICK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06756	NRCAM; neuronal cell adhesion molecule	-	Cell adhesion molecules	ko04514	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.