Gene detail

Detailed information of ENSTIFP00000017199.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_015770983.1, PREDICTED: uncharacterized protein K02A2.6-like [Acropora digitifera]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000018438

ACTGCATCGGACAAACCAACGTCATTTATGAACGTTACTGCTTTAACAACAGGAATCAAGAAACTGGGGAAACATTTGACGCAAGACATGAATGCGCTTAGTCAGAGAACAAAGCAAGGATCCAGAGGCAAAAACAAGAGCAGACCAAAGTTTGTGGAATGCAAGTACTGTAGCCGGAAACACGAAAGATCGCGTGATAAATTCGTCGCGTTTGGAAAGGAATGCACGAAATGTGGCAAAGCAAATCACCTGGCGAAAGTATGTAGGCAAGAAAATCCTAGCCCTAAAAAGGATAGGAAAGAACGCATCCATCAATTAGGCACCTCACCAGAGTCGCAGGATTCAAGCGACGAGGAATACTGCTTCACTCTCTCTCTCGAAGGCACAGAAGAACATGTCAACAACGTTGACAGCTCATCTTTTAAATCAAAGATCTTTGCAACGATGACAGTTGGAGGTCAACCGGTTAGCTTTCAAGTTGACAGTGGAGCAACATGCAATGTTATTAGGAAGAACATAATACCCAAAGAATGTCAGGTCACCCCATGCACACaagttttaaacatgtttaatgGCACAAGAATGCAAACAATAGACAAATGTCGAGTACCTCTATTAAATCCCAAATTAAACGAAGAACACAAAGCGGACTTTGTGGTCATCAATGAGGCGTGCACTCCACTGTTAGGGTCCAAAACAGTTCAGCAAATGAAGCTAGTTCAAGTACATTACAAAAACATCACCGCAGTTGAAAAGGAAACCGAAGCACGTGGCCTCACAATGGATCAGATTTCAGCCCAATTCCATGATGTTTTCAATGGAGAAGCCCGAAGACTAGAGAAGAGGCTTCACTTAGAGATCGATGACACGATAGAACCAGTCAGGCAGCCTGTGAGAAGAATACCCGTGGCCATGAAGCCAAAATTAAAACACGAACTAGCTCATCTAcaaaaaatcggagtcatcaaaCCAGTCGACACGCCAACAGATTGGGTGTCAAGCCTCCCAGGTGTACGTACGGTCGCGGATGACATTCTCATCACCGGTGAAGGTGACACACTGCTAGCCCTCCTGGCAAGATGCAGAGAAAAAGGGGTGAAGCTCaacaaagagaaatttaaaCTGAGGATGTCTGAAGTTCCCTGTGTCGGTCAAGTCGGTCAATTACTAATGAAAGATGGTATAAAGCCAGACCCATCCAAGATAGAAGCCATCCAAAAAATGAGTCGACCCAGCGACGTGAAAGGTGTTCAAAGGATTGTAGGCCTAGCGAACTATCTCACAAGATTCCTGGAATATCTGGCGGACATCTGTGAGCCTCTTCGGCAGCTAACTCGCAAGGATTCGGAGATCAAGCAAGCAGCCACGCAGGCACCTGTCCTGAGATACTTCAATCCTGCAGAGGATACTGTGCTACATGGCGACGCCTCAGACACTGGTCTTGGAGCCACACTATTACAAAATGGCCAGCCAGTAGCCTATGCGTCCCGCTCACTAACGGATACAGAGCGCAACTACGCACAGATTGAGAAGGAGCTACTAGCCATTGTGTTCGGAGCAGAGAAGTTCAACCACAATCACAAACCACTAGAAGTAATCTACCAGAAACCTCTCGTTGCTGCCCCCAAGCGTCTCCAAAGAATGCTCCTCCACCTACAAAAATATGACGTGGAGATATATTTCAAACCAGGCCGGCACATGTACTTAGCAGACACACTTTCAAGAGCACCTCTTAAAATCGAGGAAATACGGATGGTCGACTTTCTACCTATCCATAGTGCTAGCCTGGAGAATATCCGCCGAGAAAGCCTGAAAGACAACTCAATTCAAGCTCTACAGAAAGTGATCAAGAACGGATGGCCTGAAACCAAGGCGGATCTTCCTGTCCAAGTAACACCATACTTTGATGTACctattactagtattctgttttgtcgttgtcattcTTTTTCACTCCCCTTTCGtctctgttctagacatagatCCTtaaggcatcatgtaaccttatctgagcttctaaagatatgccaaaaattgcaatacagagaaaaaagcagctctaagcaagttaaaaaattaataaacactcagctttaa

Transcript

ENSTIFT00000018438

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10401	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17919 all species →	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00077 all species →	RVP	Retroviral aspartyl protease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR041577 all species →	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR018061 all species →	Domain	Retropepsins	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000017199.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.