Gene detail

Detailed information of ENSTIFP00000018981.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029211857.2, WD repeat-containing protein 76-like isoform X2 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000020329

CCCAGCATTGTCGGATCTACCAAATGAATGAATAGGATAGCGATAAATTAGTCTTCTCTCGAATTGCATATTTTATCGTTCTGTACAGTAATGGCCAAGAGAAAGAACGCGGGAAGTTTGCCAGAAACACCGAACGCAAAAAAAACCAGAGGAGTTAGTGTCGTTCTTGTAGACGCGTTGTCTCCAAGTTCACATGCAAAGCCCACGGATACAGAAAGGAAAACGCGAAGTGGTTCACTGAGAACATCCGCTTCCAAAGTTTCTGAGGAGTCTTCAACCAAGGAAAGAGATCTTTACCGCTGCTCACTCACTAATGGAGTAGATCAAAGCAGTGAGTTGTCAGAATATGAAAAAATGCGGCTGGAGAATATTCGAAGAAACAATGTATTCTTTGAAGAGCTGAACTTTAGTCAGGTTAAGCTTGAATTGTCAGGGGGCTCACCATCTACTCCAAAAGTAAAGCAAAGAGGATTGTCCACTGGCAGACCCAAGAAGAGTCCACAAGCTTCACCTTTACCCACACGACAATCACTTCGCTTGCAAAAGAAGGACCCTTCAGGTGTTGATTATCATGAACCGAAAAACCACACTTCATTGCAAACTGTTGATGAGCATCCACGGAAGGCTGGACCTTTGGAAATGATGCCCTGGAACAATGTTGATGAAGCGGATTCCCAAGACTTAATTGATGAATTAACAGTATTAGCGAACATGctacacaatgaaaatttgaaatgcGAGGACATCAAGAGTAGCACTCTAGAGAGCTACAAAGCCACTTTGCAAGGCCTTAAAATCAACGAGGATCATGTTGTTAAGCTTGTTCCAGATAGGATCTTTTCATTGACATTTCACCCAGCAAGATATAAAACCCTTTTGTTTGCTGGAGACAAATGGGGTAAACTAGGCATTTGGGATGTGGGTTCGGCAAAAGGTGAAGATGGTGTGTACCTTTACGAACCACACTCTCGTCCAATCAACTGCATGTCATTTGACCCAAGCAACTGTGGAAAGCTATATACAGCAAGTTATGATGGAACAATGAGGTGCTGTGATGTTGCCTCTGGCATTTTCCAGGAGGTTTATACTTTTGACGATGATGACTCCACCCGGTTTATGTACTTTGCCTTTGGTTCTCCCAGCACAGACACCATATTAGCTGCAACTGATACTGGATACGTGTTAGTGCTTGACACAAGAACAAATGGCAAAATGAGCCTGGCAGAGCAAAGTTATGACCTTCATAATAAAACTATCAAGTGCATCGATGTCCATCCATTAAATAAAAACCTGTTTCTTACCTCCTCGAATGATGGGGTTGTTGCTTTCTGGGAcgtgagaaatttaaaaaacatgcattcaagTGTCGGTGTTTTACAGCGGGGCCGTGCTGTGACATCTGCTTATTTCTCACCACTGACTGGCAGTCAAGTGTTGGTTACCTCAATGGATGATTTTGTCAGcaTAAACCAAGTTGACTCCTCTGGAAAGGTCTCATccactcccaaatgctgctttAGGCATTGCAATCAAACTGGCCGGTGGTTGACAAATTTCCGCGCAACATGGGATCCAAAATTTGATTCCTACGCTGTTGTTGGAAGTATGAGATACCCAAGACAGaTCGATATTTTCTCTTCGGAGATAAAAAGTAGCGCTCTGATGCATCTTACACACGAGAACCTGAGCTCGATCAATTCTATAACTGTCTTCCATCCTTCGGTAAACAAGCTTGCCGGGGGAAATTCAAGTGGTAAAGTTTTCTTGTGGACGGAGTGATGCTGCGTTGGATAGGAATTAATTGAGAGCACAGAAGCGACTTTACTACAGAATAAAATAAACATCGTGCATTGGTAATATTGCCGTGGCAGCTGTGTTGGGATTCGACTTGTACGATTTTTCGCATCACTAGAAGTATGAAAAGGAGCCAATATAATGTCGGCAATGGCAGCTGCGAACTTGAATGTTATGCATGTACAAAGAACAAATCCGATTACTGTTATCGGAATTTCTTGAACTTACAATGAAATTGGAATAACAGACAGCTATCATAAGTTAGCTTACAATATTACGATGTGTTCACTGAATGAAGGTTAccctttttatcatttttcatgtttgttttaACTCGTTCTCTGTGACGGGCCAGGTTTGAATTTCTTGGTCGAAGTTTATCCATTTTAGGCAGGGAATCACTAGAGTCAAAGTTAACCTTCTCCCTGATTATATGTTTAGCTCAGTAGCACTATTGTGTTCGGAAAGTATAGTAATCTCGAAGCAATAACATGAATAATCCATAAATTAATAAAGATCac

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4KLQ5	WD repeat-containing protein 76 OS=Xenopus laevis OX=8355 GN=wdr76 PE=2 SV=1
B2KIQ4	WD repeat-containing protein 76 OS=Rhinolophus ferrumequinum OX=59479 GN=WDR76 PE=3 SV=2
A6PWY4	WD repeat-containing protein 76 OS=Mus musculus OX=10090 GN=Wdr76 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003214 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050853 all species →	Family	WD repeat-containing DNA damage-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14773 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:2000001 all species →	Biological Process	regulation of DNA damage checkpoint	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24755	WDR76, CMR1; WD repeat-containing protein 76	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.