Gene detail

Detailed information of ENSTIFP00000019201.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029187555.2, LOW QUALITY PROTEIN: cyclic AMP-dependent transcription factor ATF-6 beta-like [Acropora millepora]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

ENSTIFT00000020561

ATGATGTCTCAAACGGAACTTTTAACCTGGTCAGAGCCGGACACAAAATTTTTCGCCGATAATCTGCTGGGAGTTGAAGATTGGGGAGACTCGATTACAGATCTAAAATTCAATCCAGACGACTTATTTTTGGAAAGCAAAGATCAGGACTTGCAATTAGAGGCCAAGGATGATCAACTTAGTGAATTTTTATCAAATCTTGGATCAGATCCACCTTCTCCTATGCTCGAAGATTTTAATTTCACTTCAAGTGTATGTGTAAAAGAGGAACCTCTTTCTCCTTTCTCATCAAATTCGTCCTGTACCTCTCTTCCAAGTTCACCTGAGAACCAGtttctcatAAATGGGGACAGTTCGCCTGTACACCAGGGGAATGCAGATTTTGAATTACTACATGCCAGTCTGCTCTCAAATCCTGCAAATATTAAGTCAGATGCTGCCCTCACACCAGTTTGTAATGTTAAAAAAGAGCGATTACCCAGTTCACAATCCTGTAGCAGCAGTGGCAACATGAAGCCTATCAAACCCATGCCAGTCACCACGTCTATTCCTGTCAGCATCCAGAAATCTCCAGTGACTAAAGCTGCTGCTGGTATCCCTGTTTATATTCCTTGCACTGGTTCGATACCAACCAATAGTGTAGTGTCTGTGGTAGTTGGGAATAAGGTGAACCCTACAGTTTCAAATACAGCTGTGGTTGGTGGAAGTAGTTCCAGTGAGGTGGATGCAAAGCttttaaaaagacaacaaagaaTGATAAAGAACAGAGAGTCAGCCTGTCTGtctagaaagaaaaagaaagagTACTTGCAAAGCCTTGAAAACAAAGTGAAGGAGGTTTCAAACTTGAATGAGTCATTGAGAGTGCAGAACGAGAATTTAAAAAGAAGGGTTAATGAATTGGAAGTAGAGAATACATTGCTGAGAAGTAGAAATCCAGAGCTTATGAGCACCATAAAAAAGTCCACATGTGTTttagttgttgttctgtttgtaGTTTTAAACATTGGTCCTTTCAGTAATTTAAAAGAACAGTGGAGATTCAACAGAGGGGATTTTTTACCCGACTCTGTGGTTCATCGTGGCAGAGCTCTTTTGAATTACCAGGGTTCAAGTGATGAACCTAACGATCTGGAGAAACCTATGATGTCTTCTGCGCCTGTCAGTCGAGGATATGACAGCAAATCAGTTATCAAGGCAACACATCCACGCATGCTCAATACCTCacagaaaaatatatatccttTGAAGGCCAGAAGCACAGAAAGAAAAGATCTCATGGTGATAAGAAACAAGTGGGATTTCCTCGGTGATTCTAAACACAAGAGAAGGAATTTCAGGAGAAAAGATAGGAAGTCCAAATCGAgaaggaaatttgaaagaaaacaacagaatTCTACTCTTGATGAACAGTTCTACTGTCCAAGTTCGTTTAACAAGACCGAGGTCAATAGGATTAATGAAGCTCTTGAAGGATGGGTAAAAAGATACGCAGATCAGCGTTTGGTAAAGCAGAGAAAGCAGAGACGTAGGCAAACCAAGATGGAATCTGCCATCAAGGAGCTGGCCTTAAGAATAGCATCAAACTGCACTTCAGACGTCAAGCGAATGATCAGCAGGCACAAGTTTTCACGGAAGCCCAATTCGGCCTCCATGAATGCAGTTCAATTGTTCCAAAGCGGAGATACGTACAAGGCTTTTGAAGACGAAATCAACAGGAAACCCGATACTCTGTACGTTGTGTCTTTTCGACGGgatcaTTTGGTATTTCCTGCAACAGAGTTCAACGCTACTCAAAGACCGAAAATGTCTTTCATGATAATGGCAGCCCCAAACAGAACCGAGTGGCACCAAGACGATAGCAGTAACACCGATATGATTACCATGATGCAGATAGATTGCCAGGTTATGGACAcgaagcttgtcaatattaaaaGATCAAGTATTCCTGTACAACATTCGGACACACCCTACTTCAGCAAGACTTCATTCACCGCCCCTAATGGAAACACCTTTGTCAAACCAgccaaataa

Transcript

ENSTIFT00000020561

ATCAGTGATGAGTCAGTAGTAGACTGTAGATTGAGGGTTACTTCGCTCTTTTATGCGGTGTCGGGGAATTAATCGATGAAATATGATGTCTCAAACGGAACTTTTAACCTGGTCAGAGCCGGACACAAAATTTTTCGCCGATAATCTGCTGGGAGTTGAAGATTGGGGAGACTCGATTACAGATCTAAAATTCAATCCAGACGACTTATTTTTGGAAAGCAAAGATCAGGACTTGCAATTAGAGGCCAAGGATGATCAACTTAGTGAATTTTTATCAAATCTTGGATCAGATCCACCTTCTCCTATGCTCGAAGATTTTAATTTCACTTCAAGTGTATGTGTAAAAGAGGAACCTCTTTCTCCTTTCTCATCAAATTCGTCCTGTACCTCTCTTCCAAGTTCACCTGAGAACCAGtttctcatAAATGGGGACAGTTCGCCTGTACACCAGGGGAATGCAGATTTTGAATTACTACATGCCAGTCTGCTCTCAAATCCTGCAAATATTAAGTCAGATGCTGCCCTCACACCAGTTTGTAATGTTAAAAAAGAGCGATTACCCAGTTCACAATCCTGTAGCAGCAGTGGCAACATGAAGCCTATCAAACCCATGCCAGTCACCACGTCTATTCCTGTCAGCATCCAGAAATCTCCAGTGACTAAAGCTGCTGCTGGTATCCCTGTTTATATTCCTTGCACTGGTTCGATACCAACCAATAGTGTAGTGTCTGTGGTAGTTGGGAATAAGGTGAACCCTACAGTTTCAAATACAGCTGTGGTTGGTGGAAGTAGTTCCAGTGAGGTGGATGCAAAGCttttaaaaagacaacaaagaaTGATAAAGAACAGAGAGTCAGCCTGTCTGtctagaaagaaaaagaaagagTACTTGCAAAGCCTTGAAAACAAAGTGAAGGAGGTTTCAAACTTGAATGAGTCATTGAGAGTGCAGAACGAGAATTTAAAAAGAAGGGTTAATGAATTGGAAGTAGAGAATACATTGCTGAGAAGTAGAAATCCAGAGCTTATGAGCACCATAAAAAAGTCCACATGTGTTttagttgttgttctgtttgtaGTTTTAAACATTGGTCCTTTCAGTAATTTAAAAGAACAGTGGAGATTCAACAGAGGGGATTTTTTACCCGACTCTGTGGTTCATCGTGGCAGAGCTCTTTTGAATTACCAGGGTTCAAGTGATGAACCTAACGATCTGGAGAAACCTATGATGTCTTCTGCGCCTGTCAGTCGAGGATATGACAGCAAATCAGTTATCAAGGCAACACATCCACGCATGCTCAATACCTCacagaaaaatatatatccttTGAAGGCCAGAAGCACAGAAAGAAAAGATCTCATGGTGATAAGAAACAAGTGGGATTTCCTCGGTGATTCTAAACACAAGAGAAGGAATTTCAGGAGAAAAGATAGGAAGTCCAAATCGAgaaggaaatttgaaagaaaacaacagaatTCTACTCTTGATGAACAGTTCTACTGTCCAAGTTCGTTTAACAAGACCGAGGTCAATAGGATTAATGAAGCTCTTGAAGGATGGGTAAAAAGATACGCAGATCAGCGTTTGGTAAAGCAGAGAAAGCAGAGACGTAGGCAAACCAAGATGGAATCTGCCATCAAGGAGCTGGCCTTAAGAATAGCATCAAACTGCACTTCAGACGTCAAGCGAATGATCAGCAGGCACAAGTTTTCACGGAAGCCCAATTCGGCCTCCATGAATGCAGTTCAATTGTTCCAAAGCGGAGATACGTACAAGGCTTTTGAAGACGAAATCAACAGGAAACCCGATACTCTGTACGTTGTGTCTTTTCGACGGgatcaTTTGGTATTTCCTGCAACAGAGTTCAACGCTACTCAAAGACCGAAAATGTCTTTCATGATAATGGCAGCCCCAAACAGAACCGAGTGGCACCAAGACGATAGCAGTAACACCGATATGATTACCATGATGCAGATAGATTGCCAGGTTATGGACAcgaagcttgtcaatattaaaaGATCAAGTATTCCTGTACAACATTCGGACACACCCTACTTCAGCAAGACTTCATTCACCGCCCCTAATGGAAACACCTTTGTCAAACCAgccaaataaataaaactaaacGCTTCAAATTATGTAGTTATAAAAATGGAGTATATAGTTATTAAGAAGAGAACCTTCGTTGTTGTTTAGGGAAACACTTTCGTACAACCAGTCAAAATCACCTTGCTTTTTATAGCCAAAGGCAAAAGCTTTACAGAAGATAGTTATTTAGTAAACAAAGACTTTTGGTTCTTGAGCCTTCAAACACTGCTTATCTTTCGTGGAGGCCATATTTTTATCACATGAAACCATGTGGACTTTTCAATTGTGAATAAAACTTGTATAATTTCGTCTTGCTTGCAGGCTACTAAGTATGATTTAACACCAATAACATTAAAATAATGCGCGTTACGCACCTTGTCCCTAGGAGAATCGTCAGCGAGTTCTGTTATTATTGCAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F6VAN0	Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Mus musculus OX=10090 GN=Atf6 PE=1 SV=2
G3V909	Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Rattus norvegicus OX=10116 GN=Atf6 PE=2 SV=1
P18850	Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Homo sapiens OX=9606 GN=ATF6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005714 (this species only)
Transcription factor family	TF_bZIP · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00170 all species →	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827 all species →	Domain	Basic-leucine zipper domain	Interproscan
IPR046347 all species →	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR051882 all species →	Family	ATF bZIP Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46164 all species →	ATF6, ISOFORM C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000019201.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.