Gene detail

Detailed information of ENSTIFP00000019573.1 in Montipora efflorescens

Genomic Location: BLFP01002141.1:335854...375185
NR annotation: XP_029184531.2, transmembrane protein 120B-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSTIFT00000020953

ccaaaatggcggcgataGCACGGATCTCTAGCTTGCAGGAATGGGAGGAAGAATGGGATGTCTTGGAAGAGGAGACGCAGAAGTTTAAGcaaACAAAGTTTCAAGATTATCTTGAGAAAATGGATGAATTTCATGCTAGTCAAAAATCCTGTGTGTCTGCTGTGAATTTACAGAAAAGAAGACTCGCAGATTTTCGGCAATCCCTTCAACGGTTCATGAAAGGAGAATTAACTGATGAGCAGAAAGCACATGGTTGCCAACTTCAGTTGAAAATTGCTGAACTGGAAAGAAAgattaaattttttgaaactaGTCTACCTTCACAAGCAGGGTTGTTCCTGAAGTGTTGCTTGGGGAATATTAATGTCTCATTGTATAACAAAAAGTTGGATTACAAAAACGATTATGAGAACTTCAAATTTAAGATGATATTGATTAGCATGTTGTGCACCATTTTAGATTTGTATGTTTTCAACTACAGAATAGCAGATGCCTTGTTTCATGCCCTGCTGTTGTGGTACTATAGCACTCTTACCCTTCAAGAGCATATTTTGATTGCCAATGGATCAAGaataaagGGATGGTGGGTCGCTCATCACTATGTGTCCATCATATTATCTGGATTACTTTTAATATGGCCAGATGGAAGAGTATATCAACTGTTCAGGAGACAGTTCCTCTATTTTTCTCTGTATCTATcctTTGTTCAGCTGCTTCAATTCAGATATCAGAGTGGTGTTCTGTATCGCTTGAAAGCACTGGGAATCAGTGAAAGTATGGACACAACTAAAGAGGGTTTTCAGTCTTGGATGTGGCGAGGTTTGGGCTTTGTCATCCCATTCCTAATTGTTGCTTATCTGTTCCAATTGTACAATGCCTACACCTTGTACCGACTCTCTTTTCACCCAGAATGCACTGATTGGCAGGTGTCTGCTCTAAGTGTGGTATTTTTCACACTCTTTGCCGGAAACATGACAACACTCCTTTTTGTGTTGCaacaaaaaatcaccaaaacGTGGCGAGTTCCCCAGATGCCTTGTGGCTAGACAACGTTAACGTGGATCACCTGTTCTTATAGGAGAAATGCTTCTAAATAAGATCAGTAACTGCTGGATGGCTTTTTGCGTCAAATAGTTGTAGACCGTTTTGGGGTATAACGTCATATTTGAGAGATTTAGCGTCGTGTTGACGTGAAAAGACGGGAAGCTTCCTATCGTATTCTTACTTTTCTAATTTTTTGAGAAGTTAGTCTGTAAGCTTGTAGGCGACAGGTAAGAAATGAACAAGTTTGATTTTGGCAAAGCGCTATTTTCATCTTGACGTTTGCGGTTTGGTGCAAATGCGATGCTAGATTTCTCTATAAtttaagggttagggtttgtGATTGACCGCCATAATGTCCTCTTCAATTTGTCGCTTTTTACCGAAATCTCTCCATTAAAAAGACAAAGTTACGCAAAAAGAAGCAAGCTCCATTCTTCATTTAGCGTTAGTAGAGCTACTGACTCAGATTGATCACGtacgaaatttaaaaaagattaCGACAAAACCTTGCTATCAAAATCGTGCAATTTATAAGAGGGGTCAATGTTCCAACTGGTTTAAGATTTGCTATTCAAATTTAAGGACGTCGTGCTCTACTTTGTGCCTTGGTGTTTCCTTGGATGAGCAAAAAAAACGCAAATGCGGAAATACAGAAGATTCATTTTCTCCAGTCTCCCAACATTTACATAAGATGAGCTCTATTTGCTCCACCACACCCACTCTCGGCCTACCAACATGACGTCCATTGCCTGATCGTGATTTCTAATTTAGTGGAAAGGAAAAGTAAAcaggaatttttattttgcgaaGAGGTAATCTGAAGTTGTcaagtaattattttggaaaGATAATTTTTATCTTATTGTTATAGAATGAAGAATGTACAGTACGCCTTATTTTTACGGAGAACGTATTCACATGAATAAAGAATAAAATGGCTCAAATTTGCTGAGTTGAATTGTTTGCACTCGTGTACATCAAAGGGCAGTTTCAATTTAACG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q63ZG0	Transmembrane protein 120B OS=Xenopus tropicalis OX=8364 GN=tmem120b PE=2 SV=1
Q5EAX9	Transmembrane protein 120B-A OS=Xenopus laevis OX=8355 GN=tmem120b-a PE=2 SV=1
Q1LY80	Transmembrane protein 120B OS=Danio rerio OX=7955 GN=tmem120b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006283 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07851 all species →	TMPIT	TMPIT-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012926 all species →	Family	Ion channel TACAN/TMEM120B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21433 all species →	TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26608	TMEM120; transmembrane protein 120	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.