Gene detail

Detailed information of ENSTIFP00000020173.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029212816.2, glutamate receptor ionotropic, NMDA 1-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000021605

ATGGATCGCCGAATCGTTTTGTTGATTGCGATCTATTTGTTCGTCTTCGTCGCTTTTCAAAAACCGTGCAAAGCGACCGTTTCATATTTCGGAATCGGAGCGATGCTTTCCTCAGCAGTACACGAGAAAATCTTCAAGGAAGCAGTGATGAAAATCAATGCGGTTCCAAGTAATATTAACAAGACAGTGAGGTTGAATGCCAGCTCGTTTGTTCTGGATTCGAACCCTATCCGCGCAGCGTTGAGTGTTTGCGACAAACTGATAGCAAACGGGGTAGTGGCCGTGATAGTGAGCCATCCAAGCCAAGAAGACATGGCACCGCCGATCTCCGTGTCGTACGCCTGCAGTTTTTATCATATTCCGGTTATTGGGATTTCGGCTCGAGAAACTATCTTCTCAGATAAGTCTATCCACCAGACATTTCTTCGGACTGTTCCGTCTTACTCAGATCAAGCCTATGTGTGGCTGGGCCTTTTAAAGAGATTCAGATGGAACAAAGTCATCCTACTGACTAGCAATGATCAAGATAGTCGCATGATTACCACAAAGTTCACAGGTTTGGCTGAGACAAAAAACATCaagATAGAAAAAACAATCCTGTTTCAAACAGGTTGTGTGAATGTTACATCCCAGCTCCTGAAGCTAAAAAAAATGCAGTCAAGAGTAATTTTATTTAGTGCCAGCGTGGAAGATGCAACTATTGTGTATCAAACTGCCTTACAACTTGGAATCACTGGGGCTGGCTACGTTTGGTTGGTTACAGAGCAGTCCTTCTCAGGTGTTGCCAGAAATAAGCTTCCACAAGGTGCTATTGGGATGCAGTTGTCTAATGGATATAATGAATCTGCTCAAATACAAGATGCTGTTGACCTGGTTGCTAAGGCACTTGATGCATTGGTGACTGGCAATAGAAGTTTAACGTCTCCCACATCTAGCTGCAGAGAAACTGTCCATTGGGATAGTGGTCAGATTTTGTTCAATGAATTAGTGAACACCACACTAGAGAATGGTAAAACAGGTCACCTAATGCTGAATGGAAATGGTGATCGTATCCACTCAGTGTATCATATCCTTAACCTAAAGAACAGAGACGACAAACAGTTAACAGTTGTTGGAGAATATCGAAATGAGACGGTGTTGATCAATGAAACCATTACTTGGCCAGGAGGGAAAACTCAACAACCTAAAGGATTTTTTGTTTCTACTCATTtaaatGTTGTGACCTTGGTGGGTGAACCTTTTGTATTCATCACCTCTATGCCAAGAAGTGGATTATGTGAAGAACTTGATGATGCCCATGCAAAACGCAAGCATGTCAAATGTTCTGGAAAGGTTTACGGCGAGCATGTTAAACTGGCATCCACTGACAAGAATGaccactgttgctatgGTTTTTGCATGGATCTGTTGAAGAAACTGGCTGACAACGTGAATTTCACGTTTGATGTTCATTTGTCAGAGGATGGAAGTTATGGCTCTTTGAGAAGGGTGAGAAGGCTTCATGGAGGCTGTGAAGTGTTATTCTTTGCGATAACCCAAGAGAAACACaagcctaaaactTTCAGGACctcaatgggatttgaacccgtgaccgctaTAAAGTATACCGAAAATGCAAACGGCGCGTTCTACACTGCTAACCTGGCAGCTTTTCTCGTCCTCGATCGACCTAAAGCTGTGGTCAGCGGTATCGACGATCCCAACCTGCGTAATCCTTCCGAGGATTTCAAGTATGCCACAGTGGCCAACAGCAGTGTCGATGCGTACTTTCGTCGACAAGTCGAACTGTCCTCTATGTACACATTTATGGAAAAGTACAACGTTAAGACTGCCAAAGAAGCCATACAGAAAGTGAAGAACGATGAATTAAAGGCGTTTATCTGGGATTCACCAGTGCTTTATTATGAAGCGTCTCAGGACTGTATGCTTACCACTGCTGGCGAACTGTTTGGCCGTTCAGGATACGGTATCGGGATGCCGAAGGGATCACCTTGGACCAATAAAATATCGCTTGCCATCCTGAACTTTCACGAGAGTGGTGCAATGGAGGAATTGGAGACTTCGTGGATCGATACAAAGAAATTCGCTGAGCAGAGCAACTCACCAGCTACCCTTGGGCTCAGTCACAAGTTGGGTGTCTTTATTATGGTGGCAGCTGGAATTGGCGCCGGAgtggttattattattctgGAAATTCTCTATCACAAACACCGGGGATGGAAAGAAGAGCAGAAAGAGATAGCAAAGAAGACGACGGACAAATGGCGAACCAAcataatgatgatgaagaaagaaagagcCAGCAATGGCCAACAACCCAATGGCGTGTTAGATTCGCATCCTCTGCAGACTGACGGAATAGCACGCAGAAATCCCATTTACAACCCCGAGAATCACCTGGATGGCGCGTTCACGTACAACTAG

Transcript

ENSTIFT00000021605

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A1L8F5J9	Glutamate receptor ionotropic, NMDA 1 OS=Xenopus laevis OX=8355 GN=grin1 PE=1 SV=1
P35439	Glutamate receptor ionotropic, NMDA 1 OS=Rattus norvegicus OX=10116 GN=Grin1 PE=1 SV=1
Q05586	Glutamate receptor ionotropic, NMDA 1 OS=Homo sapiens OX=9606 GN=GRIN1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000921 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10562 all species →	CaM_bdg_C0	Calmodulin-binding domain C0 of NMDA receptor NR1 subunit	Domain	Interproscan
PF00497 all species →	SBP_bac_3	Bacterial extracellular solute-binding proteins, family 3	Domain	Interproscan
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR018882 all species →	Domain	Calmodulin-binding domain C0, NMDA receptor, NR1 subunit	Interproscan
IPR019594 all species →	Domain	Ionotropic glutamate receptor, L-glutamate and glycine-binding domain	Interproscan
IPR001638 all species →	Domain	Solute-binding protein family 3/N-terminal domain of MltF	Interproscan
IPR049873 all species →	Domain	Glutamate [NMDA] receptor subunit 1-like, N-terminal LIVBP-like domain	Interproscan
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR015683 all species →	Family	Ionotropic glutamate receptor	Interproscan
IPR001320 all species →	Domain	Ionotropic glutamate receptor, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18966 all species →	IONOTROPIC GLUTAMATE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015276 all species →	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000020173.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.