Gene detail

Detailed information of ENSTIFP00000020191.1 in Montipora efflorescens

Genomic Location: :...
NR annotation: XP_015775814.1, PREDICTED: uncharacterized protein LOC107353937 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSTIFT00000021628

ATGCTTTTCTTTAAGGCTGGTAAATTAGCAGCCCATTTTTCACAATGGCAGTCTTTAACCTCAGACCCTGAAATTCTCGAGACTGTATCAGGTTGCAAAATTGAATTTGATACAATTCCAAGCCTTAATAAGGTTATGGTCCATGCAGTGCTCTCTGAGACTCAAACAGAATCTGTTGACACAGAAGTCTCTAATCTGTTGCGTAAACAAGCAATTCAAGCCTGCGACCATGAGGCAGGGGAATACATCTCCCCCATCTTCACCCGGCCTAAGAAAGATGGATCACACAGAATGATATTGAACCTAAAGTCCCTAAACAAACATATTACTCACCATCATTTCAAGATGGATACAGTGTTAACTGCTGTTCGACTAATGAAACCTGGGTGCTTTATGGCGTCAATCGACTTAAAAGATGCCTATTATTCAGTATCAGTACATTCTGATTTCCAAAAGTACCTGAAATTCAGCTGGAGAGGCCAGTTGtacaagtttgtttgtttccccAATGGACTAGCCCCTTGCCCTAGACAATTCACAAAATTGTTAAAGCCAGTTTTCTCCAGCCTCAGAAAACTTGGGCACATCTCTGTTGTATATATAGATGACACCTGGCTTACATCCGAAGACTATAACTCTTGTGTTAATAACATTGCAGAGACCATTACCTTATTGGATAGGCTAGGATTTGTAATACACCCTGAAAAGTCTATCTTGATTCCTACCCAAGAAATTACTTTCTTGGGATTTATCTTTAACTCAGCCAATATGACACTCAAATTGACTCCTGAAAGGGCCCTGAAATTAAAAACTGCCTGCCTGGAAAATTTGGAGGCTGCCACACCCCATATTAGGGATGTGGCCAGGCTATTAGGGCTTATGACCTCCAGCTTTCCTGGAGTCATGTATGGAGCCCTTCATTATAGGGCACTTGAGATGGGGAAGACTTGTgccttgaaacaaaataaaggaaattttgACAGGCCCATGACTTTGTCTAGTGAAGCAAAATCAGACATTCAGTGGTGGATTGACTCTATTTCAGAGGCATACAATCCTGTAAACCATGGAGACCCTGACATCATCATGACCACTGACGCCTCCTTGTTAGGATGGGGTGCATGTCTTGATGGCATGACAACAGGGGGGAGGTGGAACCCAGATGAGGCCACCCATGATATCAACTACTTGGAGATGCTTGCTGTCCTATTTGCTCTGCAGTCCTTTTCTGACAAGGTGTCAGCAAAACACATTAAACTTATGGTTGATAATACCACTGCTGTGGCCACCATAAACCAAATGGGCACTTGTCACTCCAACCTAAACAATAAATTGGTACAACAAATATGGGAATGGTGTATCTTACATGGGGTCTGGCTAACTGTAGCCCATATACCAGGCAAATCTAACACAGAAGCAGATAGGGAATCAAGGTTAACTAGGAAGGAAACAGAGTGGTGCCTTGACAGATCTATTTACAGTGCTGTCATACAAAAGCTGGATGTAACACCAGATATCGATCTGTTTGCTTCCAGACTGAACTACCAACTTAAACCCTACATTGCCTACAGACCTGACCCCGGGGCTTTAGCAGTCAATGCTTTTCATATCTCTTGGAAAGAATACACTTTCTATGCATTTCCACCATTTTGCATTATACAAAGAGtcctgcaaaaaataaatattgatcaAGCAACAGGGATAATCATAGTTCCCAATTGTTACCAAAAACCCCATAACCCAGCTAGCAAAGATACAGTCAGCAGATGGATAAAGGAATTTCTTAAAAAATCTGGCATAGACGTATCATCCTATGGGGCTCATAGTACTCGTGCTGCTTCCTCTTCAGCTGCAAGCTCCTCACCAACCATTTCCCTCCAGACTATCATGAATGCTGCTGGCTGGGCCAGGGAAAGCACTTTTCgcaaattttatgataaacCAGCTGACTCAGAGAGTCCAAACTTTGGAGAGCAACTTTTATTGCATTGTAATGAAAAGCAATAA

Transcript

ENSTIFT00000021628

Protein

Uniprot

Uniprot term	Description
P0CT41	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1
P0CT35	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR052055	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33050	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan