Genomic Location: BLFP01002329.1:440598...450406
NR annotation: XP_020614421.1, nitric oxide synthase, brain-like [Orbicella faveolata]
Species Montipora efflorescens · all data for this species · gene families
| CDS |
| ENSTIFT00000023973 |
| Transcript |
| ENSTIFT00000023973 |
| Protein |
| ENSTIFP00000022371.1 |
| UniProt accession | Description |
|---|---|
| O19132 | Nitric oxide synthase 1 OS=Oryctolagus cuniculus OX=9986 GN=NOS1 PE=2 SV=1 |
| O62699 | Nitric oxide synthase, inducible OS=Canis lupus familiaris OX=9615 GN=NOS2 PE=2 SV=2 |
| Q26240 | Nitric oxide synthase, salivary gland OS=Rhodnius prolixus OX=13249 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001036 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02898 all species → | NO_synthase | Nitric oxide synthase, oxygenase domain | Domain | Interproscan |
| PF00258 all species → | Flavodoxin_1 | Flavodoxin | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050607 all species → | Family | Nitric Oxide Synthase (NOS) | Interproscan |
| IPR036119 all species → | Homologous_superfamily | Nitric oxide synthase, N-terminal domain superfamily | Interproscan |
| IPR004030 all species → | Domain | Nitric oxide synthase, N-terminal | Interproscan |
| IPR044944 all species → | Homologous_superfamily | Nitric oxide synthase, domain 3 superfamily | Interproscan |
| IPR044943 all species → | Homologous_superfamily | Nitric oxide synthase, domain 1 superfamily | Interproscan |
| IPR008254 all species → | Domain | Flavodoxin/nitric oxide synthase | Interproscan |
| IPR044940 all species → | Homologous_superfamily | Nitric oxide synthase, domain 2 superfamily | Interproscan |
| IPR029039 all species → | Homologous_superfamily | Flavoprotein-like superfamily | Interproscan |
| IPR001094 all species → | Domain | Flavodoxin-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43410 all species → | NITRIC OXIDE SYNTHASE OXYGENASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004517 all species → | Molecular Function | nitric-oxide synthase activity | Interproscan |
| GO:0006809 all species → | Biological Process | nitric oxide biosynthetic process | Interproscan |
| GO:0010181 all species → | Molecular Function | FMN binding | Interproscan |
ENSTIFP00000022371.1.Genes whose expression across the transcriptome samples of Montipora efflorescens tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Montipora efflorescens, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
