Gene detail

Detailed information of ENSTIFP00000024260.1 in Montipora efflorescens

Genomic Location: :...
NR annotation: CAH3037491.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSTIFT00000026039

ATATTCCCCGTGTTTCTTACCAGTAGCATTCGTTTTTTGTTTCAGAATCCCTGCAGCAGCAGCCCGTGTCTAAATGGTGGAACTTGTCAAGCCGGATTTACTAGTAAAGGATTTCGATGCCTATGTACCAACATTTGGTATATTATGATTTTTTCTTCAGCAAAATCTTGCAGCCAATTGAAACGAATGGATCCTGCAGCAGATAGTGGAGTTTACATCATCGATCCTGATGGCAAAGGAAACTTAGCGCCATTTAAAGTCACCTGCAACATGACTGAAATGAACGGAGTCGGCGTGACAATCATCAGTCATGACAGTGAGAAGAGAACGCACGTCAAGGGATATGAATCAGCTGGTAGTTACTCACGTAACGTTCAGTACACTGGAACAAGTCTGTCTCAGCTGGCGATGCTCACCAGAGTCTCCTCACACTGTGAACAGTTTATTAAGTACGAGTGTCATGCTGCTATGATTTTCCGCTTTGAAAGCGTAGGAGGATGGTGGGTGTCACGTGACACCCAAAACATAAATCACTGGGGTGGAGCATCTGGTCATAAAAAGTGCGCGTGCGGGATGACCAACTCATGCGCAGACTCTCTCTTTGGTTGTAACTGTGACAAGAATGACATGGTCTGGCGTGAAGACAGCGGTCTCCTCACTAACAAGACTCTGCTTCCAGTTAAACAGCTAAGGTTTGGAGATACTGGAGACAGAGGGGAGCAAGGATACCACACACTGGGAAAATTCAAATGCTATGGAACACTTTTGGTGAAATATATTTGTAATATTATAGAGCTGTGTACCATAAACAGATGGAAACATGCAATCCCAAACGGCGACCGCATCATCATCTTCAAAGAGCCAATACCAAATATGGCCATGAAAGATCACTTGGTCAGTAAAGAGGAGGTAATGAATGAAGGAAGCTGCCGAGTGAACTGCTATCTGCACCCTGACTGTGTCACTATTAATATGAGGCCCCTAACAGAAGGAAAACTGATTTGCGAATTGAACAATGCCACTGCTCAAAACATTTTGAATATTCCCGGGTTTCTTACCAGAAGCGTTGGTCTTTTGTTTCAGAATCCCTGCAGCAGCAGACCGTGTCTAAATGGTGGAACTTGTCAAGCTGGATTTACTAGAAAAGGATTTCGGTGCCTTTGTACCAACAGTTCCTTTGCCGGAATTCATTCAAAATCTTGTAGCCATTTAAAACAACTGCATCCTGCAGCAGAGAGTGGAGCTCACTTAATCGATCCTGATGGTAAAGGAAAATTAGCGCCTTTTAATGTCATCTGTAACATGACTGACAAGAATGGAATTGGTGTGACAGTCATCATTCACAACAGTGAGAATAGAACATTGGTGGATGGATGCAATGCGCCTGGGTGTTACTCACGTGACATTAATTACACTGGAGTGAATTTGTCCCAACTGGCGATGCTCACGAGAGTCTCAGCACACTGCGAACAGTTTATCAAGTACGAGTGTTATCACTCTAGATTACGCTTTAATTCCAATAACGATCCCATTGGGTGGTGGGTATCCCGAGattcaaagaaaatgacatactgGGGCGGAGCAACACCTGGAAGTGGGAAATGTGCATTTTGTAATTGTGACAAAAATGACGCAAAGTGGCGTGAAGACGGCGGACTGCTCACTGATAAGTCCACTCTTCCAGTTAAACAGCTCAGATTTGGAGATGCAGGGAAGACAAgaaaaaatcacaatgaaagAGGCTTCCATACGTTAGGGAAGTTGAAGTCTGCCTATGATCGCGCCATCGTGTTTAAAGAACCGCTACAAAACAAAGTTCTGGAGCATCACGTGATCAGGACAGAAAAGGTGCCAAACGAAGGGAGCTGTCGAGTGAAGTGTTTTATGGAGCCAGATTGTGTATCCATTAATATGGGACCTTTGCAAAACAGCGGAGAAATAAGTTGCGAGTTAAATAATGCTACCGGCGAAAACGAACATAAAGCCGACCTAATAGAACGAGCGAATTACACTCACCTGGCTATCAAGAATCCCTGCACCAACAACCCTTGTGGTAAAGATAGCAAGTGCCAAGCTGGATTCACTTGGAGAGGGTTCCGATGCAAGTGTATTTCAGGAAACCAATGCAAAGGTATCACCACCAAAGTTGAATACAGTATTTTCCGAGTTTGGCCCAGTTTTTTGGTACATAAGGTTGCAAAATCATGCAGCACCATACAGAAGAGCTCCATGGCAGCAAGTGGCGATTATTTCATCGATCCTGATGGACCTCTCGAATCAAGTCTGCCGTCGTTTAAGGTCTTTTGTAACATGACTGACAAAAACGGAATTGGTGTCACAGTTATCAGTCACGACAGTGAGAACAGAACACTGGTGGATGGGTACGAAAACAGTGGGTCATACACTCGTGCTATTCATTACACCGGAGCGAATCTGTCCCAGCTGGAGAGTCTTATCAGAGTCTCCAAACACTGCGAGCAGTCTATAAAATATGACGACCCTATTGGATGGTGGGTTTCACGTAATGGAACTAAGATGACGTACTGGGACGGGGCATCAGGTAGCAATCAGTGTGCATGCGCGAAAAATAACAGTTGTGCAAACCCTGATCGTAATTGCAACTGTGATAAAGATGACTCTACATGGCGCGAAGACAGTGGTCTCCTCACTAACAAAAGTCATCTTCCAGTGAAAGAGGTTCGGTTTGGTGATACCAGCAATATTACTAAGGAAAACGTTGATGTCGACGAGAAAGGCTACCATACACTGGGGAAATTGAAATatttgttgggttcatgtgCACGTTCCCATGAAtcgaaaggactcgatgaaaagaaaaaaatgtttgtactTGAAGGGCGGGTTGTAGAAGAAAGAGAAATGACCCTCTCACTTATCATGTGCTCAaatcgtgggttcgaatcccgtaagagccacctgaatttatattttgccggtaaaatcccttctcaggttgaatccgtttttacctgggttaaattggtgatcctcattttacctaggttgaatacgcactcaggtgaattgaagaaactttttggATCCTAA

Transcript

ENSTIFT00000026039

Protein

Uniprot

Uniprot term	Description
Q94887	Neurexin-4 OS=Drosophila melanogaster OX=7227 GN=Nrx-IV PE=1 SV=2
P78357	Contactin-associated protein 1 OS=Homo sapiens OX=9606 GN=CNTNAP1 PE=1 SV=1
P97846	Contactin-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cntnap1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR050372	Family	Neurexin-related cell adhesion and synaptic protein	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15036	PIKACHURIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24706	SCUBE2; signal peptide, CUB and EGF-like domain-containing protein 2	-	Hedgehog signaling pathway	ko04340	deepkoala