Gene detail

Detailed information of ENSTIFP00000027508.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_044174524.1, 1,4-alpha-glucan-branching enzyme-like isoform X1 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000029533

TCGTTATGCTGTTTGCCCTGAAAATGATATCCTTTATGAGGGTGTGCATTGGGATCCACCACAGCCCTACCAATGGCAACACAGCAGACCCAGGAAAACTTCGGGCTTGAGAATTTATGAATGTCATGTTGGCATAGCCTCTTCAGAAGCTAAAGTTGCtagttacaaagattttacgTATAATGTTATTCCAAGAATAAAGAAGCTAGGATATAACTGCATACAGCTTATGGCTGTTATGGAACATGCTTACTATGCCTGTTTTGGTTATCAAGTCACAAATTTCTTTGCAGCTTCAAGTCGTTATGGAACACCAGATGAATTAAAAGAACTTATTGATGTTGCTCATGGCAATGGAATTTTAGTTCTCTTGGATGTGGTACACAGTCATGCAGCTAAGAATGTAATGGATGGTTTAAATGAATTTGATGGCACACAAACATGCTATTTTCATGGTAATGGCCGTGGATTCCACACTCTCTGGGACAGCAGATTGTTTGACTACACAAAGTGGGAAGTGTTGAGATTCCTTCTATCCAATCTTCGATGGTACATGGAATATTATCAGTTTGATGGTTTCCGATTTGATGGTGTAACATCCATGATATACCATGATCATGGCCTTGGACATGGCTTTGGTGGTGACTATCCTGATTATTTTGGACTTGGGGTGGATACTGAGTCACTTATTTATCTCATGTTAGCCAATGACATGTTGCATTCTCTTTATCCTGGTGTCATCACAATTGCAGAGGAAGTATCTGGAATGCCAGGATTGTGCCGTCCAATCACAGAGGGAGGCACGGGATTTGATTATCGCCTCGGCATGGCTACACCTGACTTGTGGATCAAGATCCTGAAAGAACGAAAAGATGAAGATTGGCCAATGTGGGATATTGTGTGGACTCTGATCAATCGCCGGCATAACGAGAAAACCATTACTTATGCTGAGTCCCATGATCAAGCTCTGGTTGGAGACAAAACTATTGCATTCTGGTTGATGGACAAGGAAATGTATTGGTTTATGTCAGAAACAACACCAAACACACCAATTATTGAGAGAGGATTGGCATTACACAAAATGATCagGCTTATAACCTTTGGTCTTGGTGGTGAAGGCTACCTTAATTTCATCGGCAACGAGTTTGGACATCCTGAGTGGCTTGACTTTCCAAGAGCAGGGAATAACTGCAGTTATCATTATGCACGCCGACAGTGGAATCTTGTAGATGATCACTTGTTACGATACAGATATCTGAATGCATTTGATCAGGCCATGATGCATCTTGAGGAGAAATATCATTGGCTGGAATCACCTCAGgCCTATGTTAGCTTACATCACGAAGATGATAAATTGATTGTATTTGAAAGAGGACCCCTCTTGTGGGTGTTCAACTTTCACACAAGCAAGAGCTTCGCAGATTACAGAATTGGTGCCAGTGTTGCTGGAAAATACAGAATAGCTTTGGATTCGGACGCTGCTGAATTTGGCGGACACGGACGGCTGGATGCGAACTGTGAATACTTAGTAGACAGTCAGCCATGGCACGACAGAGCATTCTCATTGTTGGTATATGTTCCCTGCCGCACCGCCTTGATTCTGGCACCTGCTTAGTTAAAATCCGTATCTTGTAATCAATTTAAAACTTGTGTAGTCAACGAATTCCTAGTGCTGCATCGACTGTTGagaatgttatttttttatcatatcTGTGGTTTTTCTATATTTTGATGGGCTTATACGATTAGATTTTAAAGTAGAATACAAGACTGGAGAATTTAAAGTACTAGTTGTGATCTAGTGTTGAACGTACAaacaaaatttagttttttcatTATTTAGCTAGTATTTGAAGAGGAAATGATTGTCCGTCTGTCTCTGTAAGGTCATTAACATACAGATACTTGAAAGTTCATTCATATCCTGTAAATCAACAATATTTCAGATGAAATTCACGTTCTTAAAAATGAGATCTCTTTAGCTGTTTAGTTTCCAACGAAACTTTGCACTGTAAAGATCACACATAGGTGTCcaaaattgtttcctttttcactCTGCGTTATTTTATGGAGTGTTACTATGTTATGAAAGGGGTTgttttccattttcaaaatgttcaAGATGGCTTTATGTTTCTCTATACACTGGGTGGTTATTTTTAGGTGAAATATTTAAATTAGAATGGGTTTAACTTACCAAAAATTGTATTTACAAGTACGACGTAGGAGTAATAAAGTTATTCTTTTCTAAAATGCCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8NKE1	1,4-alpha-glucan-branching enzyme OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) OX=747089 GN=GLC3 PE=2 SV=2
Q04446	1,4-alpha-glucan-branching enzyme OS=Homo sapiens OX=9606 GN=GBE1 PE=1 SV=3
Q9D6Y9	1,4-alpha-glucan-branching enzyme OS=Mus musculus OX=10090 GN=Gbe1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003447 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00128 all species →	Alpha-amylase	Alpha amylase, catalytic domain	Domain	Interproscan
PF02806 all species →	Alpha-amylase_C	Alpha amylase, C-terminal all-beta domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR006047 all species →	Domain	Glycosyl hydrolase, family 13, catalytic domain	Interproscan
IPR006048 all species →	Domain	Alpha-amylase/branching enzyme, C-terminal all beta	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43651 all species →	1,4-ALPHA-GLUCAN-BRANCHING ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003844 all species →	Molecular Function	1,4-alpha-glucan branching enzyme activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005978 all species →	Biological Process	glycogen biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0043169 all species →	Molecular Function	cation binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00700	GBE1, glgB; 1,4-alpha-glucan branching enzyme	EC:2.4.1.18	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.