Gene detail

Detailed information of ENSTIFP00000027774.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: KAF1608244.1, hypothetical protein FQV16_0015105, partial [Eudyptes robustus]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8XZJ9	Lissencephaly-1 homolog OS=Caenorhabditis briggsae OX=6238 GN=lis-1 PE=3 SV=2
C5GVJ9	Nuclear distribution protein PAC1 OS=Ajellomyces dermatitidis (strain ER-3 / ATCC MYA-2586) OX=559297 GN=PAC1 PE=3 SV=1
C5JD40	Nuclear distribution protein PAC1 OS=Blastomyces gilchristii (strain SLH14081) OX=559298 GN=PAC1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006968 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR037190 all species →	Homologous_superfamily	LIS1, N-terminal	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR050844 all species →	Family	Coatomer complex subunit	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19876 all species →	COATOMER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0006890 all species →	Biological Process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	Interproscan
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0030126 all species →	Cellular Component	COPI vesicle coat	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000027774.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.