Gene detail

Detailed information of ENSTIFP00000027894.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: CAH3131354.1, unnamed protein product [Porites lobata]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000029951

ATGATTTTAATTGTCACTATTGGTGAAATTAATCCTTCAGGGGCCCCTTATGGGGCTAGTTATGCAGGTCCTGTCAACTGGAATTTCAAATCAGGCTCTGGAACTGCTGCAGCAAAGGACAGAACAGCAAGTTTGAAAGATGGCAAGGGCATTGATGTAGAGGCAGTTGGCACTGTCAATGGCGTTTCTATACACGAATTTGATTTAGACTCGGTGGATGATAAACCCTGGAGAAAGCCAGGTGCTGATATCACTGACTACTTTAATTATGGATTCACTGAAGACACATGGAAGCAATATTGTGAGAAACAAAGGCGAATGAGGATGGAACTACAGATGCccaagaaaatatttGTTCATCCACAGCCAGTTGATCCCGTTATTATGCCAGATGGGAGAGCAAGGAAGGCAGGCCCACCTCCAGAGCGGAAGATGGAGGGAAGCATTGATGTTATTGGAGCGGAGGGTTCAAGAGTTGAAAGTCGTAGACGACGGGATGACGACGTGATGATGCCAATGATGGGTGATGGAATGAACCCGGATGTGGGGCCACCACATCCAGGAATGATGAATAAAAAACACTTTCCCCCAGGTCCTCCTGGAGGTCCACACGACATGCCCTCTGTATCTGGTGCACCTCCTTTCATCCCTCCACGTGCCGACCCCACAATGGGTCCCCCACCGCCAGGGCCTCCCCACGGTATGCCGCTGCATGTACCACCTGGCGGCCCAATACCTCCAGGAATGCCCCCTCCATTCCGACCAATGGGCCCTGATGGACCTCGTCATCCGGAAGGAGCACCTCCCGGAATGCCTCCTCCGGGAATGCCCCCTATGCCCGGCATGGGAGGTCCACCACCTCATGGATTTCCACCGGAGATGGGAATACCGCATGATGGGATGCCACCACCTTTTGATCCAACAGCGTTTTCTGGTCGTGGTGCCATGGGCATGCGTGGTAGAGGCCGTGGTCGAATGCCAGTCCCCGGTCCCCCAGGGGTACCAGGAATGCCTCCGCCCGGGGAATTCCCCCAGGCTTTTCATTATAACTgtaaaaaattctttCAGCAATTTCAGTTCTTCATCGAACCGTTTTCCGCTCAGCTCACGCGCTTTATCCTCATCGCAGGTATCTTCGTGATAGGCGTTCTGGGAAATGCCTTGGTCTGTTTGGTCGTCATCAAGGAAAAGCTACTGCGTTCACTAGCCTACTGTCTCATCTTAAACCTGGCCATTAGCGACCTTGGAGTGATCCTGTTCAGTCTTCCGTTCGCAGTGCTTCGAACGGAGGACATTCGTTGGCCGCTCGGAGAAGTCGGTTGCAGAGTTTTGTACCCGTTAAGCGACATCTTTCACGGGGTTTCCATCGCTAGTATCACGGCCATCGCTGTTTTCCGGTACCGTGGGATAATCTCGGGCCGAACCATGAGCCAGAGATACTCTGTGAAGATGGCAAAGATTGTGATTCTTCTTATCTGGCTTCTCTCGTTTCTGCTGTTTGTTCTACCATTGTTCTTCGTCATGGCTTACAGAGAACGCGCCGAGGAAGTCTACTGCTTTCCAAGGTTTCCGAGCAAATTGTCTTACAACTTGTATCAAGCAGAGACCTTCCTTTTAACATACCTTATCCCTCTTGCAATTATTCTTTTTACATACCTCCGTATTCGCGTTCGTCTCCACGAAAGTATTGTCCTGCACACCGAAATGCAGCGCGAATCTCGCAGGCCTGCTGCGACCAACATCGCCAGGTCGCGATGTGGTAGCGAGCGAAACCACAAGGCCCTGAAAGTGCTCGCTCCAGTTGTTGCCGTATTTGCGGTAACTATGCTGCCGTATAATGTCTTCCGAGTAATCGACGTATTCTGGGACACGTCGGATTTCGAATACTTACTTCTGTTCTTTAAGATTTGTGTCTTTTGCTTCGTTTGTAACAGCTCAGCCAATCCTCTGATATATGCGCTGTTCAATCCTAATCAAGCGTTTCACCCGTTGATGGGTCCGCCTCCCGGAATACCTTGGGAGGCAGGAATGGGTCGCGGGTTTCCCCCGGGATTTCGCGAGGGCTTCCAGGGCGCGATCACCAGACAAGACAGCGAAAGTCCTGGTGACGACGACAGCGAATTTGGTAGCAGCGATGATGACAGAAAACGTGATCGAGATTCACATAGACGGCGGGACAGGGATCGGGAGAGATCCCGAGAGCATCGGGAGAGGACTCGTGATCGTTCGCCGCGAAGAGAGCGTGACCGTGACAGAGATAGACGTGACAGAGAACGAAGACATCGGGACCGTGACAAGGGAGACCGAGATAGACGAGAGGTAATGGGTTACTCTCTAGTTGCCAACTACTCATTTTTCCATCCCTTTGTTCAATTTTCCAACTTTTCTCCCTCCAGAAAAAGACACAGCAAGACCATAAGCTCCGAAGCCTCAGGCGGCCCTGAAGAAGGAGAACTGGTATCCAGCAAGAAAAAGAGCAGAAGGACACGTGAATCTAAAGAAGTGAAGAACGAAAATACTGAGCCGCGAGAAGAGGGTCAGCGGACTCCCACTCCATGA

Transcript

ENSTIFT00000029951

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XJD3	Pre-mRNA 3'-end-processing factor FIP1 OS=Danio rerio OX=7955 GN=fip1l1 PE=1 SV=1
Q5U317	Pre-mRNA 3'-end-processing factor FIP1 OS=Rattus norvegicus OX=10116 GN=Fip1l1 PE=1 SV=1
Q5RAA7	Pre-mRNA 3'-end-processing factor FIP1 OS=Pongo abelii OX=9601 GN=FIP1L1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004847 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05182 all species →	Fip1	Fip1 motif	Motif	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR007854 all species →	Domain	Pre-mRNA polyadenylation factor Fip1 domain	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45695 all species →	LEUCOKININ RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04131	CHRM3; muscarinic acetylcholine receptor M3	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.