Detailed information of ENSTIFP00000027963.1 in Montipora efflorescens

Genomic Location: :...
NR annotation: XP_029191982.2, transcription elongation factor SPT6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62383Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2
Q7KZ85Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2
Q8UVK2Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14639YqgFHolliday-junction resolvase-like of SPT6 DomainInterproscan
PF14641HTH_44Helix-turn-helix DNA-binding domain of SPT6DomainInterproscan
PF14633SH2_2SH2 domainDomainInterproscan
PF14632SPT6_acidicAcidic N-terminal SPT6FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028231DomainTranscription elongation factor Spt6, YqgF domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR023319Homologous_superfamilyTex-like protein, HTH domain superfamilyInterproscan
IPR017072FamilyTranscription elongation factor Spt6Interproscan
IPR037027Homologous_superfamilyYqgF/RNase H-like domain superfamilyInterproscan
IPR028088DomainHelix-turn-helix DNA-binding domain of Spt6Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR035420DomainSpt6, SH2 domainInterproscan
IPR035018DomainSpt6, SH2 domain, C terminusInterproscan
IPR028083DomainSpt6 acidic, N-terminal domainInterproscan
IPR023323Homologous_superfamilyTex-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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