Gene detail

Detailed information of ENSTIFP00000029017.1 in Montipora efflorescens

Genomic Location: BLFP01003265.1:3175...30293
NR annotation: XP_015748239.1, PREDICTED: ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X2 [Acropora digitifera]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTIFT00000031197

ATGGAAGAACTTAGAAATAGATATATTCTTTTACAAGATCGTGTCGGAGAAATAGTGGAAAGAAGCATGCTGACACTTGGTCTTGCTTCTAAATCTACACCTATACAAGTGTTAAAAGGCGAGTTATTGGAAGCACTTCCCGAAACCGAACAACCTGGAGACTCAACCAGGATAGCTCTTGGTGGAATTGATCGTAAATTGCGTCTTGAGTGTCGTACAGAGGATGTTACGCGACTTACAAGGGAAGACGCCAATTTGCTTTTGGCCATTTCCTCGGTTACATTGAGATATCAAATATATATCGACAGAGGACGCCTGGATTTTGGTAAACGACTTGAAGTCGGAAGTaaggttttggtttcagttaaAGGGATTTCCAAGAATTTACCCGGTGTGATATGGTACAAAGGCGACTTACTCAATATCCCTGGCACAATGTTCGGAGTTGAGCTGCATAAAAATCCAGGGTTTGGAACATCTGATGGAACATTTCGGAACAAGCGATATTTCACTTGTGGACCAGACTCGGGTGTTTTTGTTGGACTGGATAAGCTTATGCCGATGGACGATGCAGAATATAATTCTCCCTCAAAGACACCAAAGAGAGATGAACATGGTCAAGCTAGCCTTAAAGCAAAATTAAGGGATACAGTTCTTCCAtcttttttaaaaggaaaaaatgacccGTCACTTCAGGCAATGACTGTTGATACACTTAAAATTTACCAAAGAGTAGTTACTTTTTCGGAAAACAATGACAATCCTGTCAGAGGAACTGTGCGTTTTATTGGTGAGGAAAAAGATGCAAGTGGACGACGAGTTCTTGTGGGATTGGAGCTGgaTGAAAGGATTGGTAGTGGAACTGGTAAATGGAAAGGAAGACAGTTCTTTGTCTGTAAGAGAGATTATGCTGCATTTGTTGATATAGAAACTGTCATACCTGAGAAAGATTTTGATAGTGACCCTGGAGAGGCTATGACAAGGGCAACATCACAAAAGCAGGATAAACGACGTACAAACACAACAGAACAGGGAAAAATGGTTAAACAGAATGAAGAAATGTTTGCAAGGTCATTGAGTTATGATCTTAATAAAAACCCAGGTAAACTGTGTAAGGAGAAGACACCTTTGAGAAGGGCAAATTCATTTAATTCCTCTGACATTATGTTAGCTGCAGGAGAAAGCAGCAATACTGATTCCAGAGAATTCATagaaaaacaacgtgaaatgctTGATGAATTCAAGAGCTCAAAGCTGTCTCCTTCTGAGGATGTTCCAATGTACGACATTGAAAGGACAGACAGTGCAAGTTTCAGTGATCATCTGAATTTTGATGACAAGCATTTTAGAAATTCACCTCCAAAaagtgaaccaatcactgaacaGCCTCGCCTTTCAAAGACATATCATGACTTTGTCAATATTGACAAAGAGGACTACGAGTTGCTcCTCCCCTTCAAATTGCCTTACCAGTATTTTTACCATGTAATCTTGAACTCTTTGTTCTACATGTATTATGCACATGGAACAACAATATCTGCAGAAATTCCACATTTATTCTATTTGAATTGTTTTATTAGTGGTatttttttattttcaggtgTGCAAGATCAAATGGTAGTTGATGTTCCTCATGGCTATGAAGTGGGTACTATGGTTGAGGTTCCAATGGCAGAAGGTTTACCCAGATACGGTGTTATTAAATGGATTGGGTATCTACCACAAATGAAGGATAAGCTGGTGGTGGGCTTGGAATTGGAAGAGGAACAAGCAGCATGTTCTGATGGAGTGTTTCATTCAACGAGATACTTTACCTGCCCTGCTGGGAGAGGTTTCTTTACTTTACTAAATCACTGCAGGCAAGACTCACGCTTTACTCCAAACTCACCAGCAAGTGAAAACATTTCGTCTGGAAAAGCATTTGGGAGTTTGCCTTCACCCGTCGTGGAAGGCATAACAGAGCCTCCTGTTTCCCTTGAAGATACATACTGTGGAAACATGCGTGGTCTACAGGGGCACCACAACTCATGTTACCTTGATGCTACACTGTACAGTATGTTTGCCTTCTCGTGCGTGTTTGATACTTTGCTGCATCGACGGAGGAAAGATGCTGATTTACAAGAATACGATGACGTGCAGTGTGTGCTACGGGAGTCCATTGTTAATCCTTTGAGATTGCATGGTTTTGTTCGAGCAGACCGTGTCCTCCAGCTTAGAGAGTTGCTTGACAAACTCAGCTCCACAGCTGGACTTATTAATGAGGAAAAAGATCCAGAGGAGTTTCTCAACTCCCTTCTtcagcaagttttgaaagcagACCCATTCTTGCATTTGAAATCTCGAGATGTTCGTAAAAAGGACGGCGAGGGAGCGTATTTCTATCAGATCATAACAGACAAAGACGACTCTGTCAAGCTCGCTCAAGTTCAACAACTTTTGGAGCAGTCATTTTTCTCAGCAGATATTATTCTCGCAGAGCTTCCGTCATGTCTGATCCTTCAGATGCCGCGATTCGGCAGCAGATACAAGATGTACGACATGATTCTTCCCAATCTAGAACTCGATGTCTCCCGCATTGTGGAAAGTGGTAAAAATGCGCATCATTTTGACTGCTTATATTTGCCGTTTAAGGTTCACTATAAAAAACTAGTTAatggaaatatgaaaaaatcagATAAGAAACAgataattatcataaataaatataaaatggccgttcaataa

Transcript

ENSTIFT00000031197

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NQC7	Ubiquitin carboxyl-terminal hydrolase CYLD OS=Homo sapiens OX=9606 GN=CYLD PE=1 SV=1
Q5RED8	Ubiquitin carboxyl-terminal hydrolase CYLD OS=Pongo abelii OX=9601 GN=CYLD PE=2 SV=1
Q1RMU2	Ubiquitin carboxyl-terminal hydrolase CYLD OS=Bos taurus OX=9913 GN=CYLD PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001326 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01302 all species →	CAP_GLY	CAP-Gly domain	Domain	Interproscan
PF00443 all species →	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036859 all species →	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR000938 all species →	Domain	CAP Gly-rich domain	Interproscan
IPR001394 all species →	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11830 all species →	40S RIBOSOMAL PROTEIN S3A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0061578 all species →	Molecular Function	K63-linked deubiquitinase activity	Interproscan
GO:0070536 all species →	Biological Process	protein K63-linked deubiquitination	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000029017.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.