Genomic Location: BLFP01003374.1:927108...932308
NR annotation: XP_029190994.1, NADH-ubiquinone oxidoreductase subunit 8-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families
| CDS |
| ENSTIFT00000033198 |
| Transcript |
| ENSTIFT00000033198 |
| Protein |
| ENSTIFP00000030870.1 |
| UniProt accession | Description |
|---|---|
| P42028 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS8 PE=1 SV=1 |
| P0CB97 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Pongo abelii OX=9601 GN=NDUFS8 PE=2 SV=1 |
| O00217 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS8 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006725 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12838 all species → | Fer4_7 | 4Fe-4S dicluster domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010226 all species → | Family | NADH-quinone oxidoreductase, chain I | Interproscan |
| IPR017896 all species → | Domain | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Interproscan |
| IPR017900 all species → | Conserved_site | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10849 all species → | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003954 all species → | Molecular Function | NADH dehydrogenase activity | Interproscan |
| GO:0005747 all species → | Cellular Component | obsolete mitochondrial respiratory chain complex I | Interproscan |
| GO:0006120 all species → | Biological Process | mitochondrial electron transport, NADH to ubiquinone | Interproscan |
| GO:0009060 all species → | Biological Process | aerobic respiration | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0016651 all species → | Molecular Function | oxidoreductase activity, acting on NAD(P)H | Interproscan |
| GO:0032981 all species → | Biological Process | mitochondrial respiratory chain complex I assembly | Interproscan |
| GO:0045272 all species → | Cellular Component | obsolete plasma membrane respiratory chain complex I | Interproscan |
| GO:0051539 all species → | Molecular Function | 4 iron, 4 sulfur cluster binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03941 | NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8 | EC:7.1.1.2 | Non-alcoholic fatty liver disease | ko04932 | deepkoala |
Genes whose expression across the transcriptome samples of Montipora efflorescens tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Montipora efflorescens, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
