Gene detail

Detailed information of ENSTIFP00000035682.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_020620250.1, uncharacterized protein LOC110057995 [Orbicella faveolata]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

ENSTIFT00000038433

ATGATTTTCACATCATCGGATCATGTTGTATTCAAAGTCAAAACCAAGAACAAAGTAGCAACGAAAATTCCGCAGATTCTGGATTACTCGTCCTCCACAGAAGGTGTAACCGTTGATCTGTCTGACTCACCATTAAAGGGAGCTATACATGATCCAGGTTTTGATCAAGTTGCCACTGTATCCGATTCAAAACATAATGACCACATCGTTGGGAATGACCAATCCAACTTTCTTTCCTGCACGGGTGGAAGTGACTTTTTAAAAGGAGGAAAAGGCAGTGATAATTACGTCGTCAAAGAAACATGCCAAAAAGTCAAGATAAATAACTACGatcgaaaacaaaaggttgaCCTTCTCCTCTTGGATGAAAAGTTTGAGAATTTGGTACTTCAAAAAAGTAACGAAAACGTACAAATCAAATCCAAGTTTGGAAGTCCCGTCGTGGTATTATACCGCTGGCTAAGGAACACTAGGTATCGACATCTTTGGATTCGAACCAAGGATGGAATCACGGTTGATATTAATGACGAACCTTTAGCATTGCATCCAGTGGAGATATCAAAGGACCCTAAAGAATGTCAGCTGAAACAGTCTAATTGTTCACCTAGAGCTGTACTATATGACCTAAGAAAAGCCCCTTGGGAAAAAGTGACAAGATTTCAACTTCAAGGAAGCTCCTGTAGTTACAGAATCAGAGGGAATAACCTCAACAACTATATTGATCCTGGTCCTGGCAATGGATACAATTATCAGGTTTTAGAGGGCAGAGATGGTTCTGATACCTACGTTCTAAAACACGGCTACGGAGAATTCAACATGATTAAAAACTTTGCAAGAGATAAGAAAACAGATATCCTTCAACTTGGGTTGGAACTAAATGATATTCAGTTTTATTTCCAAGGGGAACACGACGTTATTCTTACTTCTAAGTCAAGACCTAGCTCTCTCAGTGTTcgcattttaaattattttaaaagccCTAGACATCAGCACCTTCAAGTTGTAACGTCAGACAAAGTCGCATTTGAGATCCAAAGAAAGCACCCCTTTATGAAAGTGCTTACAGTGGATTTTTCCTTATCGGATTCACCTGTTAACATCTCTCCTGTTCAAAATCGCGTTTTGTCAACAGCTCATTCAATACAAGGTTCCCTCACCCAAAAGAATTCATTAACCGGTACAGAAGAAACCAAGGAGATAAAAGGTGGAGATGACGTCGACACGCTATACGGCAAATCATCTAAGACTATAATGAATGGAGCAGGTGGAAACGATGAGATTCATGGTGACCAAGGAGATGACGTTCTTTTGGGAGGAGAAGGAGATGATTCTCTCTATGGTGGAGAGGGGAACGACTATTTCTATGGAGGAAATGGACGCGATCTCATAGATGGTGGCGATGGAGCTGATACCATCGCTTTTAAAGGGGACGGATCTGAAAAGACTGGGGTGCACATTGATTTATCAATAGGATTTGGAAAAGGAGCGGATGCCGAAGGCGACATTTACAAAAGTATAGAACATGTCTATGGATCAATTCACGATGACTTCATTTCAGGATCTGACAGTAATAACAACTTGTATGGTCGATATGGGGATGACGTAATCTTAGCCCACGGTGGGACGGACAAGCTCGTTGGGGGTGAAGGGAAAGACATCTATATACTATCTAAATCTTGGGGTATAAAAGTCATTGATAATTTCGCTAATGATCGGGAGGAGGATACGCTGTACTTGATTGATGTCAACGCGGACGACGTATGTCTGTTTCGCATCGGAAATGATCTCTACttacaaattgaaaaaacaacattttcttcTGTGTTATATCACGGCTATCAGCTAACCATCGTCATTCAAAACTGGGCTGTCAGCTCTAAATACAAGCATTTAAACGTTGTATTAAAAGACGTTGTTTGGTCGAGTTATGTGCTGCAGAGAGTTCGACGGAAATTTGATGAGTTGGATACCAAGGTGAAACATATTGCTACCGAATCAAACTTTAAGGTTGTTTCATTTGACGGATCCTCAGTGCAACTGTCATGGAATACACTTCCAGGTCCTCCCTTAGACGAAACTACTGAACTACTTCTGATGAAGTTAGATACTAATAACCCAAAAGGTATGACCACAGTGGATGTTGGCGGACAAGCGACAGTGTCAGTCTCCTCGTTAGATCCAGTGTCGCATTATgtgtttgcattgtttttaagaAAGTGCTCCGCAACGATTGCCACCTCTTTTACTTTGACGACTTTTGGCCGAAGAAGTTCGTGTCCGCGAATAAGTGTCCAAAATGCACAAGCAACGAACGAACCAGCCCTGTCTGTGACCCATGGTAcgaaaacaaatattaaatgCAATTCTGGGTTTAAGATGGAagatgaatattattattatgacgcTGGAGCACATTACAAAGGGGTCTGTATTGATAGCAAATGGCAGCCCCCTCTTCCTTCATGTCATATCATCAAGCATTGCCCCCCAGATCTAATCGCACCGAGTAATGGGCAACTTACCGTTAAAGGTCAACAAGAAGGATCTACTGCATGTTATGTGTGCAACAGAGGTTTTAAATTAGATGGGGTTCAAGAGCGTACCTGCCGAGCTGATGGGGAATGGGAGGAAAACGATCCACGTTGTCTTCCCATTGGCTGCATGAAGAAACCAACTATTGCTAATGGTGAATTTGTACCCTGCGACAATAATCGCCCAGACATACACGGAACTTTCCAAGATCCTCGCGAAGGGTATTGCCTACAGCTGATTTGCCAACAATTCTATTTTGTAAGTGTAGAAAAAAAAGTCGTAATTCAAGTGGAAAGAAAATCCAAGATTTTACGTTCTAGAGAGATTCCTGAGGGTGGAAGAGTTTGTGCGGAAGGGGAATGGCTTGGTTACACGGACGCAACTTGCAAACCAGTTTCACGATTATCTGATGAGCAAGAAGCGTGGTATTCAAAAAGTGGTATCttacaaatattaaaaaatggAGGTTGGGAAGCAGCAAAGCAGAGAGATGGTAGCGAAAATCTTCCTTGTTCAGCGATGTCTTGTGTTTATGGTAATCCTGGTCGGTTGTCGAGTAAGACATTGCATGTTCTCCCTCAGTCACCCAACGGGATCAAGGTAGTATGCCCAAAGATTCGTTTTGTAGATACGATAACACCATATGAAGGAAAGCTGGAGGTATTGGTCAAGCGACGATGGGAAAGGTTGTGTTATGATCACCACATGACTCAAAATCCTCAGAAGGAGATGAAAGAAATATGCGAAGTGTTAGGAGCCGAAACACACCAACCCAGCCTTGTACCACAGAATATTGGGATGACAGGCTTTATCCTGAAATGTTCAGATGGAAAACCATTGTAA

Transcript

ENSTIFT00000038433

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0C6B8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002384 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00353 all species →	HemolysinCabind	RTX calcium-binding nonapeptide repeat (4 copies)	Repeat	Interproscan
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR018511 all species →	Conserved_site	Hemolysin-type calcium-binding conserved site	Interproscan
IPR050557 all species →	Family	RTX toxin and mannuronan C5-epimerase	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan
IPR001343 all species →	Repeat	RTX calcium-binding nonapeptide repeat	Interproscan
IPR011049 all species →	Homologous_superfamily	Serralysin-like metalloprotease, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38340 all species →	S-LAYER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000035682.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.