Genomic Location: not available for this species
NR annotation: XP_044174777.1, splicing factor 3A subunit 1-like [Acropora millepora]
Species abbreviation MEFFL · all data for this species · gene families
| CDS |
| ENSTIFT00000038826 |
| Transcript |
| ENSTIFT00000038826 |
| Protein |
| ENSTIFP00000036010.1 |
| UniProt accession | Description |
|---|---|
| A2VDN6 | Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1 |
| Q15459 | Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1 |
| Q8K4Z5 | Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005100 (this species only) |
| Ubiquitin family | ULD|UBL|NEDD8 · all ubiquitin genes in this species |
| Ubiquitin family | ULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01805 all species → | Surp | Surp module | Family | Interproscan |
| PF12230 all species → | PRP21_like_P | Pre-mRNA splicing factor PRP21 like protein | Family | Interproscan |
| PF00240 all species → | ubiquitin | Ubiquitin family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035967 all species → | Homologous_superfamily | SWAP/Surp superfamily | Interproscan |
| IPR000061 all species → | Domain | SWAP/Surp | Interproscan |
| IPR045146 all species → | Family | Splicing factor 3A subunit 1 | Interproscan |
| IPR022030 all species → | Domain | Splicing factor 3A subunit 1, conserved domain | Interproscan |
| IPR000626 all species → | Domain | Ubiquitin-like domain | Interproscan |
| IPR035563 all species → | Domain | Splicing factor 3A subunit 1, ubiquitin domain | Interproscan |
| IPR029071 all species → | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15316 all species → | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0000381 all species → | Biological Process | regulation of alternative mRNA splicing, via spliceosome | Interproscan |
| GO:0005686 all species → | Cellular Component | U2 snRNP | Interproscan |
| GO:0045292 all species → | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0071004 all species → | Cellular Component | U2-type prespliceosome | Interproscan |
| GO:0071013 all species → | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
ENSTIFP00000036010.1.
