Gene detail

Detailed information of ENSTIFP00000040093.1 in Montipora efflorescens

Genomic Location: :...
NR annotation: XP_015769751.1, PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSTIFT00000043208

ATGACAGAGATGGAGCTAGAACGATACTTTGGCGTGCAGACCTTGGCTGATGTGCCAGAATATGAAATAACAGAGCCATATTTATCAGACTCAAGTGGTGACTTCGTGTCGCACACACTCCACGAGCGCTTTACACGCGAAATTCGCGACCTTCCTGAGAGGCATTATGTCATGAACGCGTTTGGAAATAAGATGCACCTGAAGCTTACAAGAAACACTCAATTGGTAAGACCTGGACTCGAGCTGGAAACGCGACATGAGAACGAAGGCATCACCAGAACTCCTGCCAATCTAAATTCATACTTCCATGGAAAAGTTGCTTCGGATTCAAGCTCTTTCGTTGCTGTTGGTAATGCTAAGGGACTGACTGGCATGATCAAATTGGCACGTGACACACTCTTTATTCATCCCATACCGGATCACCTAACAAAGCACGTGATAACCAAAAGTAAGGCGAAGCCACACCTTATCTACAAGAAATCAAGGTATCCTCACGTCTGTCAATCaggtatttccatttttcttgaaTTAAATTCCCCATCTAACCTGCACAAGTTTTTACAAGTAGAGCTTTTGGCGGATGAGAATGTTGCAGTTAGGCATAAAAATGATACTGCAGACTTCCTATTGGTTCTAGCGAACATAGTGGCCGGGATGTTCCGCGATCATTCAGAGGGAAAGATCAAAGTAAACTATGTTGTCAGCCGACTTGTAATCATCACCAACAAAGAGCTAAAAGTAAGCAGAAACGCAACAAACGGGGAAAGAATGGGGAAATTAAATGATTGGATCAACAAACACAAGCCTAAAAATAAAAGCGATCCAATGTACATGGATGTTACAACATTGATTCATGTTTCATTTTCTAATCTCCGTACAGGCTTAGCCTTGGCGGGTGGCCTGTGCTCTCACAGGGTACTTGGTAATGTTAATGGTTATGCTGGATTGCAAACCGCCGGAATCATAGCACACGAGACTGCTCACAATTTCGGGGTTGGACATGACAATGGTAAACCCTGCAAAGATGGTATTAACATCATGGCGACGGTGTTGCCAGATGGTAAAGGAGCCTTAAAATGGTCTTCATGCAGTAAAGATGTTCTTCAGACAGTTCTCAGtgGACCAGGATCAAAGTGTCTGGAAGATCCTCCGCAAATTTCTCTTCCTACTTTGTCGGCCAGCAAATTGGCTAAAAAATTACCTGGTTTTCTATTCGATGCACATACTCAGTGTAAATTTCTTTATGGAGAAGATTTTCGACAATGTCCTCACAGCAATGTAAGTTGTTTTTCTACAGATTTACCTGACAATGGCGattCTTGCGTGCTTGCTTGCATTAAGCATGGACGGTTAGTAACTTATCACGGCACAGTTGCTGACGGTAGTCGATGCAATAATCGCCCAGAAAGTTTTGATGTCTGCATTGATGGGAAATGCCGCGTAAGTAAAAATGCTTCAATTCGATCCAAATCAGTGAAACACCTGTGTAACCCGAGtaagccgccatattggattgaACAAATATTTAGCGAAGAAGAggtaatatgtacttattggcTGAGAGGGACGGCCGACACGAGGTCCGTGCGTCATGACCCAGGGTCGACCcatggtcaaatattttcctgtccggcccgacgggtacgcttcacttggtttgactgtaactctaatttatttttttcaagatggcaTCTAACAGAATGGAGTAGGTGCTCCAAAACTTGTGGAAATGGAAGCCACTCTCGTCTCGTTTATTGTCGAAAACAAATCAACGCATCACATTTTGAGAAACTCAACGACTCTTCATGTGACATTAAAGCCAAACCGAACGCGCACAGATTGTTGCAACGTTGTAACGAAGTACAATGTCCCGCCGAATGGAGGCCTCAATCTTGGTCTAAGTGTTCTGCCACGTGTGGCGGTGGTCTGATGACTCGAAAGTTAGAGTGCATCAAGATAAACGAACTTGGAATGACTGAGTTAGCTCACAACCACCTTTGTAGATATGCAGTCCAACCACCTACTAAAACAGTCTGCAATGACGACAAACCTTGTGATCCTCCCCCCGAAATTCAAGTGGCATGCTTTGTTGGTGCTGATAAGCTGGGTGAAGTGGTCGGTGATTTCACGAACGAGATCAAGTGGGAAAATACAAATGAAGTTGTAAAGAAGTGCGCTAATTTGATTCACCAAAAAGGCTACAAGCTTTTTGCCATGGGTCGCAATGGCCTTTGTTTATCCGGGAACGATATCAGAGACAAATATCACACACGTGGAACGGAGAGAGCATATTGTAGAAGTGGAATTGGAATTGGAAACAGTATTTTCGTTTATTCATTCGAGCCCGTGCCAAAGCTTGAACCATTAGGATGTTACCGTGACGATGGAAACAACCGCACCTTGCCTGATCTGTATGCTAACTTCAGGAATCAAATCCGTTGGAGACAGATGAATCTGACGGTGAACCAATGCGCGCGCGTGGCTCACGACATAGGATATGAATATTTTGCCATTCAATTTTATGGGGAGTGTTTCGGAGGAAGGAATGCTGGTACAAGGTATAACGAATATGGCAAAAGTTCGTCATGTTGGGAGTTTGAAAAAGAAAGCCGTCTTGGAGTTGGATCACACTTCTCTAATTTTGTTTATCGAATTAAACAGGTTTGTAAAGTAGAACGCTTTAGAGCCTTCGTCTTTTTTATAGAAGTTAAAAATTTACTTAGCTTTCACCATGGCCACCGAGTTCACACTATGGAGCGAGGAGGTACCAGGAATTCTGTGGCTTGCGCTTTAACGTCAGGGTTAGCGAGGCCTATGAATtcttgtccttatccgagaagactagataGTCCGGCCATTTGCTGGTACCATCATTACAAGAGCAAAACTGCCCAGGGAGCGAAACGGTTCAGGATGGTTCCTTCCTTTATAGGGCAAAATGCACGTTCCGCCTTTTAG

Transcript

ENSTIFT00000043208

Protein

Uniprot

Uniprot term	Description
P59510	A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Homo sapiens OX=9606 GN=ADAMTS20 PE=1 SV=2
Q19791	A disintegrin and metalloproteinase with thrombospondin motifs gon-1 OS=Caenorhabditis elegans OX=6239 GN=gon-1 PE=1 SV=3
P59511	A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Mus musculus OX=10090 GN=Adamts20 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17771	ADAMTS_CR_2	ADAMTS cysteine-rich domain 2	Domain	Interproscan
PF19030	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan
PF01421	Reprolysin	Reprolysin (M12B) family zinc metalloprotease	Domain	Interproscan
PF01562	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR041645	Domain	ADAMTS, cysteine-rich domain 2	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR001590	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR002870	Domain	Peptidase M12B, propeptide	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan