Gene detail

Detailed information of ENSTIFP00000040110.1 in Montipora efflorescens

Genomic Location: BLFP01004426.1:1145329...1168253
NR annotation: XP_044176234.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114946858 [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTIFT00000043227

ATGGCGGACAGAGAAGACAAGAAAAACACTTGCGAAGAATGTGGCAAGAGTTTTATGAAGAACTGGAGGCTTGAGGAGCATTTACGATCTCACACTGGTGAGCGCCCTTTCAAGTGTACAGTTGAAGGCTGTGGCAAGTCTTACATCCGACCATTCCATTTGAGACGACACATGCTTTCCCATTCAGGACAACAACCATCATTTCAGTGCTCGTTCCCTGGTTGTTTGAAAACATATAACGACAAGCATAACTTGAAACGGCATGAACAGAGATCACATGACTATCCTTTCAAGtgTGACTATGAAGGATGTGACCAAGCTTTCAAGAAAAGCAGTCAACTGAGGAGGCATACCTGTCTTGTTCACACTAAGGAAAGCCTATTCAAGTGTAAAGTGGAGGGCTGTGATCGTGGCTTTGACAGCAAGACAAGGCTGCTACGGCACATGAAGGTCCATTACAGCGgtTACATTTGCAGTAAGCCTGGTTGTTCTGAGGCATTTGGCACATTTAACCAACTAAGGGTACACATCTGCAATCATGGTAGTTTTGAGTGTAAGCACTGTAAAAGGGTATTCCCAAAAGCGTATGAGttAAAGAAACATGCCCGAATCCATGACTCTGACAGAAAGTTGTATGAATGCCCCAGAGAAGGATGTTCAAGAGTCTACACCAGGGAAAGAAACCTGAGGACACACATAAATTCCTATCATGAAGGCATTAGAGAGTATCGTTGCACGGTGGAAGGTTGTGCTGCAGAATTTGCCCACAAGCATTTActtttctttcagaaaaagctcaaaaagaaaaagaaaccagttTCGTTGGCCAAACGACTCAGTGGATACCGCTCTTCGCTATCTGAAAGTTCTGACAATCTTTCAGATATTCCGCAAAAAGGGAGACAAGTACCCAACAAGCTGCAGAGGATTGCGTCTGAAAATGCCTCAGCGAAGGCAATGAATGCGGGTAGTGATCATGTGCGGGAGGAGGAACAAGGCAGTGATCGAACTGTGACAAACATTGGGGACTCTGTAGAAGATGTGACCGTTGTACCTTCAGATGAGATGAACACTGCAAACATGAACGAGTCCGAGGAGATTCAAGCTCGTGATTCTTCAAGAAATTTGTCCGAGGCTGTTGTTGCAGGCGAGCAACCTGCAAAGGAAAGTTCAGTTAACAGCAACAATGAAGACGGGTGCAGGATTGCTTTGGATCCTTGCGCTGGTTTGACAGCCTCTTTAGGTGGCTGTAAAATCTCTACTTCACGTATGGACACCTCTGAACAAGCTCAAAGAGGGAATAATGCGTCCTCTGCTCGGGGTGACATTGCGAGAGAATGCTGCAACTCCTCAACAGTCGAAAACGAATCTCCTTTGACGAACACCTCGTGTGAACAAAATAACGAATCGGACGTTGATGTAGAGTTTACATCGGAAGGCGAAGAAGACGGCGAAACGGGCATGGACTGGGAACCAGACGATAGTCCTTTCGTACAAACCGATCATGATTCTGCGTTTGATTTCGAAGACATGCATCTCGAATCAGCCGGCGAATCGTATTCTCGGAAGGAAGTTGGACCTTCGTTGACAGGGAGTATCGAAAGGAGAGGACATGTTAACGATCCAAAGGAAAGGATGGATACAAACAACAAATCGTGTGAGGATTCCAGTTCGATAACATTTGATGCGCCATCAGTTGCGGAAGGTGTAGATGTGGATGCCTCTCATAACAGTAATCCCGAACCCAAGGAAGTGGATACTGCAGAAAATTCTCCTGTTCTAAGCAAGGATAATGCACTGCAAGTGCTTGTAGAGGAAGAAGAAGGAAGCACAGAAAGAGCGATTGAAATTCAGAATGTGTGTCTTCTGGGAGAACAAAGTGTCCGTGCCAACTCCTCTAGGTCAACtgaagaagaaagaagtcaTGAAAGCGCTTTAGAGAAGCAGAATTCTGATCAACTTAACTCTGCCTTCGATACTCGAGAGAAATCGGCTGATGCGATTGGGAGCTTGATGATACAGGACGTTCGAATCGAAAGAGAGGTAACTCCTCCACGTGACAGTAGCATGCTTGTCACGCAGTCGTTGCCAGACGAGAGAGCGGTGGAGGAGAAGGAGGAGGGTGACTCGAATAGGTTAACCAACGGCGTTCAAAGCGCAATAGACTCGTGCGTCATCGTAGGTGACGTTTCGCGTAAAAGGAGTAGTCGCGACGCTGGAACATCTCTTGAAAGGACTGGAGATGCTGTGATAACCAGCAAAAATGGAGACAACGAGTGCATTCTCGCAGCCAGTCAGGAACGGGTAAACACGATGGTACAAGCCAAGAGCGACAGAAATGTTGGCGTCAAAACCTCTGTGAAGAAACGTTCGGTAAAGGCGCCTTCAGTGAACCCGGAACCAAACAAGAACTCAAAGCGAACTAGCGCGAGAGGCAACACGAGTACGAAGGTCAACAATCACGGCGGcgtagaaaaagaaaagagttcCAAATCAAACGAAAAGCCAAAGCAAAATGCGGTTCAAGAAGAATCTTCTGATGAAGTATCGAAAGCTAAATTTCGAAACAAAAGCAATATTTTTGCGTGCGACTTGCAAACGTTAGAGTTGCTGTGGAATTTTAAGGGTAGATAA

Transcript

ENSTIFT00000043227

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010392 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR051061 all species →	Family	Zinc finger transcriptional regulators	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46179 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09191	GTF3A; general transcription factor IIIA	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.