Gene detail

Detailed information of ENSTIFP00000041304.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029206981.2, ubiquitin-associated protein 1-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000044475

ATGAGACTCTTCCCCTTTATTGTCGGCTGGCTTTCAGCTGTTCTGACTTCAGACTTTTCTTTGTACTGAAAATTTGCTGAACTCGCGATAAAATCGTTGCTGTTGTTCAATGGCTAAAATAGCTGTTTCGTCCCTTTGAAATAATTCGAGCAAAAACAACGCAGGCTCGTTCTGGTGGAATGACATCACTTTCCGAAATGTTCAAGATGGCGAACAAATTGCACGATCCTTTCTGTTGTTTAGCTTGAAATTACTTCGTCATGGCTTCGTTTCAAAAGACATTTAGAAAAAGTGGAAGTCATCATGCTGAATTTCAGTCGCTGCAAGGTGTAGAAGTTAAAATTGGAGAGAAGTTCAAGCCGCCAAGAAAGGTGACGTTGCCTGTTGGATGGCAGCAAAAAGATCCTACTACTGCTCTCAGCTTAGTTTATGACTTCAGTCGTGAGAAAGATGTTATTGCAAAAGCCGATGCAttgaaagcttcaaaatataaAGAATTGGAAAGTAATTCAACTGAATCAAACGTTTCAAGTGAATCTCAAGAAACAAAGATTACCCCTACAACTTCAAGTTCAATATTCTCAAATGTTGGAACTGAAATTCTTCAACCAGTGGTGGCACCTGGCACAGGGCATAAGAAAAAAGACAGTTTCGGGGGAAAAGGCAAAAATGCTTTCGATATTTCAGACTTTGAAGGTGATACATCCACACCTTTTGAGCTTGTAGAGCTACAGACTATAAATGATATGGATGAACTCAAGAATGTTCTTCAACCAAATGCTGTAGTGACAACCacaattgaaaattcatcaacCTCAAATACTAGTGGCAAGCTGTCGAATGTTTCTTCCAGTGGGAGCAGTATAAATCTCTCCACAAATAGTACTTTGTCATCCTCAAAGAGTTCCTTGGTGAATATTTCAGGCTTAAATCTGGCTGATAGCACATTAACACCTGTCAGTGGGTTTTCAAATATGACCTTCACTTCCTCAAACCCTGTCATGGAGCACAGTGGATTGCTTTTAGATTTTGGAGAACCACAAACTTCTGCGCCTGCAGTGGATAATCTTTCAACAAGTACAGGCTCTATTCAAAGTAGTACTTTAAGCAATACAAGCTTAAATTCAGAGAACAGACCTATTTCTAGAGGAAGACTATTGCCGCCAATTGGACAGACTGTGTCCTCTTCAGGACCTCAACAGCCCCAAATGCATCAGTCTTTTCCTGCAGTTCCAACAGTTTCAGCACATTCTAGTTCAAGTAGAATACCTGTCCCTAGAGGGATTTATAGTATTCCTAATATAACTAGCCCACCTCAAGAACGACACAATAGTACTGAAGGACAAAATAGGTGTGATAATTCACCCTCTGTGTCAACAAGCCCAAGGGATCAGCTGTGGAATATGCCTAGATCTCCTGACTTTCAGAATGTGGGCGGACGTTATCCTTCACCTTTACCACCTATTGGAGGGTCATGTCTTGAAACTGATAACAAACAGTCAGTGTTAGGCCAGTCTTCCCTTCCAGATCCTTGGCCTGTTCTAAATGACACAGAAAGGGCATTCGCCGAGAAGTTTGTTGGTATGGGCTTTCCAACCCCTCGGGTAGCCAGAGCTGTTCAACGACTCGGCACAAAAGACAAAGAGGTTATTGAATTCCTGGTAAATGTGGAGGAATTATGTCAAAATGCATCTTATTCACCAGACTCTGTAGAAGTTGCTCTTGTATTTAATCCGGAAAAAGCAAAGgCCATTGAATTCCTTGACTTGTTGAAGACATTTAAAGAATTTGGATTTAACGAGGACAACATTCACGAGTGTCTTCGTGCAGCTAATAATGATAGAGAAAAGACATTGGAATACCTAATGACTTTGTCCTCAGCATAGTATTATTGAATAAAAATTTGTTATTACCGATGACAATGTAATTCCCAGTTTAAGCTGAATGTCCACACGGAGAACAAAACGGGTcacaataattaacaactattgaCCGAAGTGGAgttggctagtggtggatatttacagagccgcgaagcggtgagataatatagcacgaaaagatgattttaactcttATTCCTTCagcgattacaatattttcgggcgcagaTTCCGTGCCAATTGCTCGGCTGTGAGTAGTTTACAATTATCccgcgaaatcgcgcggaatatctcctgatacttagccgacgaggccgtaagCTGAGGGGGCTACGATATTCCGCGAGATTGAGcgggataattgttttattattcaacacattgatgacaaagcacaattttctgcgtttattgggaaaaaaagctggaaaaactaccatttatctccgcgacacacaaaattacgtatataaCAGCATATActttgagtacgcacgacgaatattgagcgtgctatgaccatatttggacattgtcacaatgtgctgaataataacaaaggatattcggagttgaGTAGCAAATCAGAGCACGCCTTCAATGCTACCCACTGTTATTAGTATCTACCACATAATTAAATAGTCCTTTTCGCGCATTCTGAATGGCTAGCTCGAGGGTAAATAGCAACATACTATTCACGTCTAAGTaaacgaagaaaaacaaaatgcctTCCCGTTTCGTTTCCGTTAACGTGGGTAAACTCAGCTGATTATTCAACTTGTCTGGTATATACTAGTGTATTTACCTCCACTTTGGGGAATAATAGTAAAAGTAATTATAAGTTTTATGAATAAGGAAAAATATC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BH48	Ubiquitin-associated protein 1 OS=Mus musculus OX=10090 GN=Ubap1 PE=1 SV=1
Q5XIS7	Ubiquitin-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Ubap1 PE=2 SV=1
Q9NZ09	Ubiquitin-associated protein 1 OS=Homo sapiens OX=9606 GN=UBAP1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006259 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21267 all species →	UBAP-1_UBA2	Ubiquitin-associated protein 1, UBA2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023340 all species →	Domain	UMA domain	Interproscan
IPR038870 all species →	Family	Ubiquitin-associated protein 1	Interproscan
IPR042575 all species →	Homologous_superfamily	Ubiquitin-associated protein 1, C-terminal	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR049467 all species →	Domain	Ubiquitin-associated protein 1-like, UBA2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15960 all species →	LD44032P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000813 all species →	Cellular Component	ESCRT I complex	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0043162 all species →	Biological Process	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24629	UBAP1; ubiquitin-associated protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.