Gene detail

Detailed information of ENSTIFP00000045568.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029195484.2, ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000049063

tcgtgaattgtgcgatcggatgcgatttgaggtcgattgtgcgaaatcgcaccatcgcgtaatatcagaaggcctgttatCATGCTGGTCCCACAAACAGTGGTAAAACGCACACTGCACTTGAGAGATTCAGCGCTGCTGACACAGGGGTGTATTGTGGCCCACTTCGGCTGTTAGCGACTGAGGTCTTTAGAAGAACAAATGATGCTGGAATACCATGTGACTTGTTGACTGGTGAAGACAGACAATGGGCGATTTCACCTGAGGAACCTGCCAATCATATTGCTGCAACTGTTGAGATGTGCTCAACAAAGATTTTTTATAACTGTGCAGTGATAGACGAAATTCAGATGATCAGAGATGATGAACGAGGCTGGGCGTGGACAAGGGCTCTTTTGGGTCTGCCCTGTCCAGAAATTCATATTTGTGGTGAACATTCAGCAGTTGATGTTGTCCAAAGATTAGTAGCCGCTTGCAATGATGAAATGGAGGTCTGTCATTACGAAAGACTCTCTCCTCTAGAAGTCAAGCAGTATCGTAGTCTTGGTGGAAAGCTTCAAGGTGTCAAACCTGGGGATTGTGTTGTTTCATTCTCTCAACAAGAGTTGTATCGTTTAAGGAGAGAGATAGAAAAGAAGAGCAGAACGAAATGCGCCATCATTTATGGTGGTCTTCCTCCAGCCACTAAGGTAGAGCAAGCAAGCAAGTTTAATGATCCTGAGGACGACTGCTCTGTGTTGGTAGCATCGGATGCAATTGGAATGGGACTCAATTTGAACATTAAGCGGGTTGTGTTCAGTAAACTTTCAAAGTATGATGGTCATGATGTAGTGCTGCTGACTCCTTCTCAAGCTAAACAGATTGCTGGGCGAGCTGGAAGATATGGCTCCAATTATCCCAATGGCGAAGCTTTAACGTTCAAAAAAGAAGATTCAAAGCTTCTACACTCCCTGATAACTGCTCCAACAGAAGATGTTAAGgCAGCAGGGCTAGCGCCAACAATGGAGCAGATTGAGATGCTTTCCCAACAGTTGCCTGATGCGagtcttgtcaaactttatGACGTTTTTGAAAGCGTGGCGCAGCTGGACGGTGCGAACTATTTCATGTGTGATTTGGAGTTTAAGAAGaaaATAGCTCACAAAATACGCGGCCTCCCGCTTTCCGTAACAGACCAGTACATATTTAGCACAGCGCCCATCAGCACCAAGACGATCGATTTAGCTCCAAAGtTCGCTTTTAATGTGTGTCACGAAATCGCATTAACGTCGTCGAAGTTAAAAAAGTTAATCAAGTGGCCTCCAAAGTCACCCAAATCCCTTGCAGAACTGCAGAAATTGGAGGCGCTTCATGAGGGACTAGACCTGTATCTTTGGCTCAGttacCGTTTTCCTGACATATTTGTGGATGTGGAGCAGATCTGTCACATGCAGCAACTTGTAGAGGGTATCATAGGAGAAGTAGTGTCATTAGACACGCTAAGGAATCTGACAGATCGGCGCGCGCGTCGTTCATCTAAGGCGATTAAAACCGCCTATACAACAACAGGAAAGCAGCCCCGCCTCAATGTGCACCTTAGGAATGACTTGAAGTGGCTCAGACAacacaaatttttaatttgAGAAAACCTGGAGTCCTGGAGGTCCTATGACATTCTTGTTGATCCTTCGTCCATGCTTCGATCAGTGGAAAAAAACACTCTTCTTATCAAACTTTATCTTAAAGCAGTTCATGcagacgttttcttttgtttcgcaGTGACACTGGCCGTTGGTCACGTGGTTGAAAGTAATGactgaatagcccatttccgagttgctgcacgCTTCACTtttaaagcgagtcctggtgcacaaacattcaaatggaaatgagttgcgtattctcatgcaaatcaaactcatttccctttcgatagttgagcaccaagactcacttcgaaaccgagacaaacagcaactcggaaatgggccaTTTGTCATCCAACTGAATTTTATTTGACGAATGTACAATGTACGTTTAATTTCATGtctgaaattgtgaaaaatattGCG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZJT0	ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Gallus gallus OX=9031 GN=SUPV3L1 PE=2 SV=1
Q8IYB8	ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Homo sapiens OX=9606 GN=SUPV3L1 PE=1 SV=1
A4IG62	ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Danio rerio OX=7955 GN=supv3l1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007002 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF12513 all species →	SUV3_C	Mitochondrial degradasome RNA helicase subunit C terminal	Family	Interproscan
PF18147 all species →	Suv3_C_1	Suv3 C-terminal domain 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR022192 all species →	Domain	Mitochondrial degradasome RNA helicase subunit, C-terminal domain	Interproscan
IPR041082 all species →	Domain	Suv3, C-terminal domain 1	Interproscan
IPR050699 all species →	Family	RNA/DNA Helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12131 all species →	ATP-DEPENDENT RNA AND DNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016817 all species →	Molecular Function	hydrolase activity, acting on acid anhydrides	Interproscan
GO:0000965 all species →	Biological Process	mitochondrial RNA 3'-end processing	Interproscan
GO:0003724 all species →	Molecular Function	RNA helicase activity	Interproscan
GO:0006401 all species →	Biological Process	RNA catabolic process	Interproscan
GO:0045025 all species →	Cellular Component	mitochondrial degradosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000045568.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.