Gene detail

Detailed information of ENSTIFP00000046302.1 in Montipora efflorescens

Genomic Location: :...
NR annotation: PFX30401.1, Low-density lipoprotein receptor-related protein 4 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSTIFT00000049832

ACAGGAATCTTTCAAGTTTGTCTTAATGACGAAGGGACAGCAATTTCGTATTCCCATTTGAGTCATTCGACACTGATCCAGAATCCAGTTGCCCTCGACTTTGACCTCAAAGATGGCAAAGTGTACTTTACAGATGTGGCAAGGAAGACGATTTCACGTTTTTTTCTGAATAACGGCTCCGCCTTTGAAGATATTTTCAGGTCCACAGATGTAGTGGTCACACCGGATGGATTAGCCGTAGACTCTGTCGGGCGAAATCTTTATTGGACTGACGCGGGGACTAAGCGATTGGAGGTCTCCAGACTTGACGGTTCCCATCGCGTGTCACTCATTACAAGCTATTTAGATAAACCCAGGGATATTATACTGGACGTCCCTAAAGGGTACGTATCGCAACTAATTTCATTATCAAGAAGGGAACTTTTGAGAATGTCAAGAGAAAGCAAACTCAAATTTGGAAAGCTCCTTCAAAAACACGGAGGGAAAATTAAAGGAAGAGCCTCGTTTTCGTTCTTATCCCTTCCCAGCGTCTTCCGCGCTACtaaatctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgacTCTTCTTCACTCTGCAGCTTTCATTGTAATCATCTACATAAACAAGGAGATGTTCAGAAGTTTGTCTTAGATGACCCAACATTTTATCTCCATAGAATCATGTACTGGACAGACTGGGGCCTGGATCCGAGAATTGAAAAAGCTGCGATGACTGGTAAAAATCGCGTTGTCCTTGTGAATTCAAATTTGCAGTGGCCCAACGGTCTTGCACTTGATCACAAAATGAACCGCTTATATTGGGTGGATGCCCACAAAGACAAGCTAGAATACTTGGATCTTAGCAACAACAATAGAGTAACGTTACCATGGTTCCCATTTCCGGGGCCTCATCCCTTTGGATTAACAATTTTTGGAAATCACCTGTACTGGACAGATTGGGTTAAAGGGGCTGTCATTCGCTGTAACAAAGATACGGGTGCCGAGGCTGCAGTGCAACTTACTGGCTTTGATCGGCCCATGGATATACACGCATATAATCTTAGTGAGGTCACAACACCAGGTAGATGGCACTTGTGTTCTCAAAGTAACGGGAACTGCAATCACATTTGCCTGCTTTCACCAGATGGAGGAGAATGCGCATGCTCAGGAGGACTAGTTATCAGTTATGATGGAAAAACTTGTCACGATCCTGCGCAGTTTCTCTTGTTTGCTGATGCCATATCTGGTACATTTTTGAAAGTCGACCCTTCCGATTCTCGATCACTGCATACTCTTTCATTATCAAGAGTTATCCGTCGTCCTGTTGCCTTAGGCTATGACGCggttgaaaacaaactttattgGACGGATGTTGAAAGGAGAACTATTTGTCGATCATTCTTGAATGGGTCCTTCTTAGAGGTCCTTTTTGACAATAATGTCGTTACTCCCTATGGATTGGCAGTTGACACCGTTGGGAGAAATATCTATTGGACCGACGCGGGAACCGACAAACTGGAGGTCTCTAGACTGAATGGCTCTTACAGAACAGCTCTCATAAGAAGGGATCTAGATCAGCCCAGAGACATCATATTGGATAGTAGTAACGGGGTCATGTTCTGGACAGAGTGGGGACGTTATCCCAAAATTGAGAAAGCCGACATGACGGGCGACAACCGCGTTGTCCTGGTAAGCTCAAGTCTGAAGTGGCCCAATGGTCTGACACTTGATGGAGAAAAGAATCGCTTGTATTGGGTGGATGCCTATCTTCACAAACTTGAGTATTTAGACTTGAATAACGATAATAGGGTAACATTGATAAACCTCCAAGCAGCATCCCATCCCTTTGGACTGACGATTCTTGGAAACTACCTGTATTGGTCTGATTGGAATTTCACAGCGATCTATCAAGCACATAAGGAAACTGGTGGTGACGTTAAGGTCATCATCAACGGTTTAGGGCAGCCCATGGATATTCATGGATACAACGTTAatcATTCTTGTTCCTCGTCATCTGGTGGCTGCTCTCACCTGTGTCTTTTAAGTCCGGTTGGATATCGTTGCTTCTGCCCAGATCAACTGGAACCTGGGGAAACTTGCTTCTCTTCGCGTAAGCTGCACGACAAATTTATTGTGATAATTGTTTGCGTCACAGTCGTGCCCTTGACCACACCGGACCCTATCTTATTTTACTCAGGACTGCTACCAGCATCGACTCCGGAGCCGAAAAGGTCACAAAGTAGATTAACGGCTCTGCCAACGTCGTTTCCAGCTTCGTTGCTGCCTTCGTCGGCAGTTTCGACAACAGTTCTGGCAGGTTCGCCTTCGGCTTTAATGCCGACAGCTCAATCGGTGTCTAAGCTAACGATTCCTACAGCAACAAAGTTGATTGCAGCGTCAAAACCAGTGGTGTTATCTTCAGCATCATTGGCATCTCTCTTAAGGTCAATGAAAAAATCACCTACTGCATCCTTATTGTTGAAGGCGTCACGTAAATCATTGGCGGCGTCAGATGGGTTTCCACCTTTACGGCAGCCACGATCATCGGCTATTTCTTTAACACCAGTCGAGCCTTCGACCACACCGAACCCTACCTCGTGTCAGGTTGGCACTTGCAGAAATGGAGGAACCTGCTCCATGCCAAGTCATACTTGCCTTTGTAGGAAGTATTTTGCTTGGTATGACTGCACCGTTTATGTcggtaaAGTGAAACGAAGTTCAGACCAAGCAACGTACTTAACGTCAGCTGACGTCATAATCGCAGGAAAATCTGTCACCGCTGGTACCTCAGAAGTTGAATTCGCCGTCTTGTTTCCATCCTTGAAGGGTCAGCCGCCTCAAAACATACCTCCTGGAGAATTAGTTGAAATGGTGAAAGCAAGTAAAGATAATATACAGAGAGATCTTGGAATCACAATCCAGTCCATTACGCAAACAACAGGCAGGAAACCAACATCTGGTAAAACAGACGTTGATCTTTATAATAAACGAAACAAAAGGGTAAAAGAGAAAGCAACTGTCGCACTACTATGTGTTATAGGGCCGCATAGCAAACACAATAGATTACACAATAGATGTCACAATAGATTACACAATAGATGTCACAATAGATTACACAATAGATTACACAATAGATGTCACAAACTTTCCAAAAGAAATGTCAAACCTAATTTTCTGTAA

Transcript

ENSTIFT00000049832

Protein

Uniprot

Uniprot term	Description
O75581	Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens OX=9606 GN=LRP6 PE=1 SV=2
O88572	Low-density lipoprotein receptor-related protein 6 OS=Mus musculus OX=10090 GN=Lrp6 PE=1 SV=1
C0HL13	Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0017147	Molecular Function	Wnt-protein binding	Interproscan
GO:0042813	Molecular Function	Wnt receptor activity	Interproscan
GO:0060070	Biological Process	canonical Wnt signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03068	LRP5_6; low density lipoprotein receptor-related protein 5/6	-	Membrane trafficking	ko04131	deepkoala