Detailed information of ENSTIFP00000046989.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_015761830.1, PREDICTED: pre-mRNA-splicing factor 18-like [Acropora digitifera]
Species abbreviation MEFFL · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2HJ41Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1
Q99633Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1
Q8BM39Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006751 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08799
all species →		PRP4pre-mRNA processing factor 4 (PRP4) likeDomainInterproscan
PF02840
all species →		Prp18Prp18 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014906
all species →		DomainPre-mRNA processing factor 4 (PRP4)-likeInterproscan
IPR004098
all species →		DomainPrp18Interproscan
IPR039979
all species →		FamilyPre-mRNA-splicing factor 18Interproscan
IPR036285
all species →		Homologous_superfamilyPRP4-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13007
all species →		PRE-MRNA SPLICING FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0008380
all species →		Biological ProcessRNA splicingInterproscan
GO:0000350
all species →		Biological Processgeneration of catalytic spliceosome for second transesterification stepInterproscan
GO:0005682
all species →		Cellular ComponentU5 snRNPInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071021
all species →		Cellular ComponentU2-type post-spliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSTIFP00000046989.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP