Gene detail

Detailed information of ENSTIFP00000047185.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029205103.1, scm-like with four MBT domains protein 1 [Acropora millepora]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000050783

CTACTGCATTTAGATGACCCCCTCTGTTATTGGGTGGCATCTGTGGTGGATGCATTTGGATTAAGGCTTAGACTGAGACTTGAAGGCTCTTTCAATGATTCTGATGACATCTGGGTCTACTTCCTGTCTGACAATGTCCATCAGTTgggatttggaaaagaacataATCTAAGACTTGATATTCCTTCTGCATTGAAGATGAAATATCCAAATGAGGACTGGGCCCAAGTCCAAGGAAGAATGCTTGGCCTTGTCAATCTGTCAACTGAAGATGACGCACTTAATAGGTCACTGAACAAGTCTCAGAGCTTACCAAAGCCTCATAACTTTAAAACTGGCATGAAACTAGAAGCTGTTAATCCAAAAGATCCTTCATCAATCTGTGCAGCAACAATTTCCAAAGTTGCAAATGAGATATTCTTCCAAGTGGAGATTGACAGTATGATTGAGTGTGGTGACGGAGACAAGCCTTCCATGTGGTGCAGTTCCAATTCCAGGAACATATTCCCTGTGGAATGGTGTAAGAAAAACAATATTCAACTGACTCCTCCTCCAGgATACCTCATTCATCCTTTCAGTTGGACAACATACCTTGAATGGACAAATAGCGCTGCAGCTCCAGACTCGTTGTTTGACTTGGATATTCCACCTCATGAGTTTGACATTGGTATGAAGTTTGAAGCTGTGGATCAAACAGATCCCAGTATAATGACAGTGGCATCAGTGACGCAGGTGGTTGGACGAACAATGTGGGTGCTGTTGGACGGATTCAAAGATGACTCTGTTGAACATATTTATGATGTGGAGTCATTTGATCTCTTTCCTGTGGGCTGGTGCAGTATGAATGGACACCCTCTACTTGCTCCAAGAATACAGCGTCCTCCTGAAGAAAACAGACGTCTAGCTTCCTTAAGGAtaacaaaacaaagggaaaataaaaaatctaCAGCAGATACTGAAGTTTCAAATACAACAAACACTTCAAATACCTTGTCAGACGTAGCGGATGACTTAAGCACCACAGACGTGAACAGTTCTGAGAAAATTGAGGGCAAGACAATTTTGGAATCAGATATAATCAATGCAGCAAGTGTAGTTGTAACAAATCAGTCGAGCATACCCGTTATTAGCAAAGATTTAGAACCAGTGGTCAAATTGGAGACCACTGCAATTAAAGAAGAGAAACACATTGCtgttaaagaaaagaaacacgaAGAACCAAGGCGTCGCGAGGTACTTGAAAAGATCCCAAGCACTCCTAAAGGAAAGTACGATTTGAGGGCATCAACACTTATCGCACGGGATTACTGGAGcaaagagaaagaagagaaagaggacGAAGAAGATAAGAAAAAAGGGAATGTTGAAGCGGTCATAGATTTAACTGAAGATGAAGATATTCAACAAAGGACAGaaatttgtatttttgtgaGGAACAAATGTGAGCAAGGACCTTTTCTGAACAAATCCAAATTAGCCAATGTTCCGGCTGTTATTGGTCCCGCTGATCCAACCATTGTGCTGACACAGCTTTTGGAACAGATTTTGCCATGTGCAGACTCCCCTAAGGAAGTTGTCAAGCTTTTtgcttgtgagacaaagaaaaggaCCATCTCGTCAATTGTTAAGactCTTAAGATCAAGCTGTCCTTGTGTGAAAACCTCATCAGCCTCAACAGAGTAGCGCGGTGTATGCATTGCGATATCGTCAAAGCTCCCCTCACAAAACAACTTTGTTCGCCTCGCAAACTGGAATTTCCAAAAGATGTGGGTAAACTCACAAGCACACCTACGAGTGGTAGTGAAAGTCATGTCACCAGAAATCTTTCTGTGGTACGCAGTTATCTTCTCGAGCCTCCAAAAACTGCACCACTTGATGCTGCAACCTTGCCCACGTCAAAACACATTACTAAGTGGACTGTTAGTGACGTTGCGGATTATATCAGGTCAACGGATTGTCACAGGTTCGCCGAAAACTTTATGAAACAGAACCTTGATACAGCATCATTCGGGAGctaaagaaaaatatgttttgtgAGACGGGCGACAACCGGAAATGGCCTTTTCACTACCCAGGGTAAGCAAGAACTACGGCTAAGAGAACGATAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JMD2	Scm-like with four MBT domains protein 1 OS=Rattus norvegicus OX=10116 GN=Sfmbt1 PE=1 SV=2
Q9JMD1	Scm-like with four MBT domains protein 1 OS=Mus musculus OX=10090 GN=Sfmbt1 PE=1 SV=1
Q05BQ5	MBT domain-containing protein 1 OS=Homo sapiens OX=9606 GN=MBTD1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005176 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02820 all species →	MBT	mbt repeat	Domain	Interproscan
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF12140 all species →	SLED	SLED domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004092 all species →	Repeat	Mbt repeat	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR038348 all species →	Homologous_superfamily	SLED domain superfamily	Interproscan
IPR021987 all species →	Domain	SLED domain	Interproscan
IPR050548 all species →	Family	Polycomb group and chromatin remodeling factors	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12247 all species →	POLYCOMB GROUP PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000047185.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.