Gene detail

Detailed information of ENSTIFP00000047789.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: CAH3029283.1, unnamed protein product [Porites evermanni]
Species abbreviation MEFFL · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000051433

TTGCTGTCTGTCCATCGcggcaatttaaaaaaaaatgcatgcaagaTATGGAGATACAGTTTTGAGTAACTTTCTTCCACATTTTacctttcttgtttttgtttttgttctgtgtATTTCATGTTACACTCAATGGACCATGCAAAAAATGCAGAGGGGGATTTCAGTCTAGTCACCATTACCCcacacaatgtaaatgtaaagaGAATGCAAACAATTCACACTACCTGAAAACCGTactcttgctttgttttattttcagacGAATAAAGAGCATTGTCAACAAATTTGAAGTGAATATGGATGTGGAATTACAACAAAGAGGAGTGGAGTTCGGGTCACTTTTTACCAAGCATAATACCATGAGACCTGCCTTGTTGGAGAAGATGCCTGTGTTTGAAGCTAAAACATCAGAACAAATTCCAAATGGAGAAGTTCCTACACAACAGGAGCCTGAGAGTATAGCCAAAGAAGTTTTAACTGAACAGAAGCCTGCTAAACAAGCGTCTGAAACATTGTTGGATCTACTTGGTGGGGGTCCCGTGGCTGAACCGATGCCCGCCCCAGTCCAACCACCGGCTCCTGCGGCCTCACCTGGAGGGGAACTCTTGGATTTACTTGGAGATCTGGATCTGGGCTCAACGAATgcagGTCCACCTCCTATGAACATGATGGCTCCGCCATCAGCCGCTGTCCCAAACCTGTTGGATGGTGTGGGATTGCTGAGTCCATCTCCATTGGGGCAGCAGCAGGCTCCTCTTCAGATGAATCATGAGCCTCTCGCCGCAGTGCTTCCCAGTCAGGACCTTTCTGCAGGTTTCCCACCAATCACAGCGTTCGAAAGCAATGGCCTGAAAATCGATTTCGCGTTCGAGAAAGTTCCAGGCAACCCGTCAAATGTAGTGTCAATTATGGTGACGGCTACAAATTCGCTCTCAATTCCAATGACTGACTTCGTCTTCCAAGCAGCTGTGCCCAAGACGTTTCAGTTACAGCTTCAGAGCCCGTCTGGCAACATTATACCTGCAAACAATTCTGGAGCTGTCAATCAAGGTGTCAAGGTCGCAAATCCTCAACAGCAACCATTACGAATGAGGCTCAAAGTGACGTACAAAGTCAATGGAGCGCCTGTCAATGAGCAAGGCGAGGTGAACAGCTTCCCTCCGGGACTCTGACAACACTGGAAAATATGtagaaaaattatattttgtacggtaaataataataatcgagATGTATTTGGCAACCAGTTGGTTGATTGGCTTATAAGCACTGTTAGGTGTAGATTAGGAAACGGTCGCAAAGAGGAAACGATTGACTTCTTCCTTATCAGTTTTTAAGGTGGTAATCTCAATTCATGATTCGGTCGCATCACAGTCGACGGAAAACGATAAATAATTGAAATTCCACAATAGTGCGATAAGAATTATCTGGAGAATGTGGCCGTTGAGACGCGTATAGAAACATCGTAACTCTGTGCAGATCTTTGAACGAGAAACAAATTCTGTTCGCGGTTTTCAAGTGACGAAGGTGAACATCTGTCCGCCTCCAAGGTTGactttgttttgctcattgcCAGGATCTTCCCAAATGGGGCAGGTTTCGTCCTATCACACAATTATAGGAAAAATTATCCACAGAATTATCTCCGCTCTTTGGCCCAGAAAAGCTCTTAATTAAGTTTGTAAACTGATTTTGTTATGGAACCGTGATAATTTGTCTCCTACGTTCTTTGAAGGTTATTCTTTGTTACATCCATTAACACACGTGGCATCGTGCTGTAAACGAGTTGTGTTGAAAAGGTCAGAGAACTTGTTAAACATTGTCATCTCCCGAAATTTTGGGCCTTTGGTTTTGATAATAAGCGAATTATTAGCCATCAATGACTGATAAGATGTTGGGTGACAAAGGCGTTTGTGATCCCATGGATACATTCTTTATGAAATGTAAAAAGcaatacacccttttaataagtctaatatatgccgttttccgctaatgacgtcaaactcatgcttttaaaatttattcagaaatgtacaaagtcttcaaacaagaaaagaaatcggaaacgttttaggcc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43747	AP-1 complex subunit gamma-1 OS=Homo sapiens OX=9606 GN=AP1G1 PE=1 SV=5
Q5R5M2	AP-1 complex subunit gamma-1 OS=Pongo abelii OX=9601 GN=AP1G1 PE=2 SV=1
P22892	AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004508 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02883 all species →	Alpha_adaptinC2	Adaptin C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013041 all species →	Homologous_superfamily	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Interproscan
IPR008152 all species →	Domain	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Interproscan
IPR008153 all species →	Domain	Gamma-adaptin ear (GAE) domain	Interproscan
IPR050840 all species →	Family	Adaptor Complexes Large Subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22780 all species →	ADAPTIN, ALPHA/GAMMA/EPSILON	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0030121 all species →	Cellular Component	AP-1 adaptor complex	Interproscan
GO:0035615 all species →	Molecular Function	clathrin adaptor activity	Interproscan
GO:0140312 all species →	Molecular Function	cargo adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000047789.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.