Gene detail

Detailed information of ENSTIFP00000048153.1 in Montipora efflorescens

Genomic Location: not available for this species
NR annotation: XP_029205144.2, lysine-specific demethylase 5C-like [Acropora millepora]
Species Montipora efflorescens · all data for this species · gene families

Sequence

CDS

Transcript

ENSTIFT00000051834

CAGGAATTGCGGTTGGCAAAGTGGCTGGAACAAGTAAATGCTACCTTAGTCAACACGGAAGAAGTCTCCTTTGATACCTTGCAAGAATTACTTGAAACTGGGAACTCACTTCCACAGAAAAAAGACCACGTCACGTGATGGCCACAGTAGAGGCTATTATTCAAGAGGCGTCTCGCGTGCCACTGTACCTTCCAAACGTGAGTGCCCTCAAAGAAGCACTCCGCAAGGCTCGTGAATGGTCTGACAAGGTCGATCAGGTTCAGAATGATGATTACTATCCTTATCTCGACGTACTGGAGTCCCTGGTTATGCGAGGCAGACCCATTCCTGTGCGTCTAGAACAGCTTCCTCAAATGGAGTCCCAAGTGGCGGCGGCACGGGCTTGGAGGGACCGTGCAGCACGGACGTTTCTCAAGAAAAACTCGACAACATGTCTCTTGGAGATCTTGTCTCCGCGGAAAGACGTCGGATTGTACAAGGCTTGTCCAAAACCTCGCAAGAAAcgggaaaaagagaaagaaaaagaaaaagagaaagaaattaTAATCGACCTCGTTGCTTTAGACGATTATATCGGCAGAGATCCTGCTTTACAGATCGCcgagtttcgagaaacggagAGAAAAGAGATTGAGGCCATGAGGCAACTTCGCGAAGCAAATATTCAGAGGCAAAAAGAGGAAGACAATAAACGTAAACTTGGCGAAAGCTTGGAAGGGCAGTATTGTATCTGTCGGCGTGGACCAGACGGCTTCATGTTACAGTGTGAACTATGCAAAGAATGGTATCACAGTTCATGTGTACCCCTCCCACGCACGCAGGGTGGTAAAGCGATGAGCAAAAGCACAGCGGCAATGGAAGCGGCAAAGGAGCTCAAGTATCTGTGCCCACTGTGTTTGAGATCCAGGAGACCTCGCCTGGAGACCATCCTTTCTTTGCTGGTATCATTACAAAAGCTGCCTGTGCGTCTCCCTGAAGGAGAGGCTCTGCAGTTTCTAACTGAAAGAGCAATGAACTGGCAAGATCGCTCTCGGCAGTATCTTGCCGATGAAAACGTGGTCTCATTGCTTGCGGCTATAAGTAGGAATTCCACAAGCTGGCCTCAAGGTGTAAGTGCCGAGAATTTGTCAGCTTCTGCTGCGTTGCTTCGTCTCGCGCAAGTAGGTCCTCAAGAAGAGGATACGAGTAAACTCGCTTCTAGCGATGTTTCAGTCACAGATGCGAATATTCCGAGTCCAGCCGAAGTAAGACCGACGTTGTCCGAAGAGAACCGAAGACAAGCTGAAGTTTTGATGATGGAAGGAGATTTGCTGGAAGTGTCACTTGATGAAATCGAGCAGCTGTGGAAAGTGTTGCTCAGTCAGAAAAACCGCGAAGAAAACGAGACAAAGGTTTTTGAAGTAAAATCAGACAAGGAGAAAGTGAAGAGAAAACGCAAAAAGAAAGACGACGAGAAAGACAAAGACAAGGCAGCAAAGAGATCTTCGAACGCCACAGCAAATGCAAGCACAGCAAATGGCACTGAAACGGAAACTCCAAAGAAACgcagaagaaaggaaaaagaaaaggtgaCCAAAGTGAAACGAGAGGAGATGGTGGACGTTGAAgaagacgatgatgatgatgacgagatCTGCGCAGCACCTTCATGTACTAAACCACAAGGTGATGAAGTGGGTTGGGTACAGTGCGATACCTGTGAAAAATGGTATCATCTTGCTTGCGTGGGACTGAGCCCAGAGAAAGCAGAAGCTATGGATTCTTACAATTGCAAAACATGCACTGGAGAAGGATCCTCTACAAACTCGGCTGTAGGAACACCAGTGCCTGCCTCGCCGGAGTCTGAGAATATTGATGTGGGTGGGACCACGCCTTCTGCCACTAGTCCCAGCTCACCAAGCCCGCCGGGCTGTTTAGTGGATGTGGAAAGCACGGATGCCGTTCATCAACAAGAAAATGCGGAGATCGAAACAAGTCCTGTATCTGTTACCTGCGAAAAGCCTTCCTTGGTGACTACGATCGATCTGTGTTCGGATAACGAAGAAGATATGGAAGCGGAAGTTGATGTGGAAACGGAACAAAGAGAACATCCGtaatgaacaattttaattaactTGCATCAAATAATTATCGCTTtgtaatgaacaaaacaagaatatttttGCAGGGATTAATCTTGCATCTCCTCGAAGTTTATACACGAACGCTGTGCCTTTTGCAAGCAAGTTTTTGTAGGTGTCTATTCACGGTGGTGAAGATGAATAATGTACGATGCTCATACCAACCAGGTTAAGAGTTGGTGGTACAAATTTTGCGTGACGTCTCAGCCCAGGTCATGGCTCTGACCTTTAGAATCTATCCGACATTATTACCTCCAATTGCAATGATTAACACGTGTTCCGGTGAAAAGACGTTCTCTGTGTATGTTTAACTTATTGAAGCATCTATCTGAGATTCTGTCAACAGTTGTATCCAATAGTTTGCTTTGCCACAAGTCTCCATTTGTGTGTTGGCATGGAACTCTTCTTCCACCGGGACATTATGCTTCGTGGAGGCAAGGCTAATGCCTTCGTTTCAAACTGGGTTAGCGGGCTAAACACAAAGACAAAGATGATTCTGGTAGGCACGCTTTCGCCGTTTAAGCCCTCATGTCACGCTATGCCCGCCTCATGAGGAAGTGGCCAAACCCTTACCATTTCATTGTTAGAAGTTAACTCGGATCTTGCGCGgtttcattaaaaacaaaaattaatcggCGTTAAATGATATTTTGGGAACTTTAAGACTTCTGATTCACTTAACAAGCTGCAAGGCGAAGTTAAGATGACAACGATATAGTCGCATCCACTTAAGCGGAAAAATGTTGTTGTAGGTCAAAGTTATTCTAgctttttgtccttctttgtcTTTCAGTTGAACGATAGCGATAACGCTACACAGTTGCCATCAACAGAATTTAGCTTATTTATATATGCTTGTAAATAATTCTCTTAAGTCGTTTATGAATTTCCTCAGTCGCATTCTTTCGTTGGCGCAGTCTACGGAATCACCAAAGGTATTACTAGTTCTATATGAAAAGCAGGTAGTTTACCACC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P29375	Lysine-specific demethylase 5A OS=Homo sapiens OX=9606 GN=KDM5A PE=1 SV=3
Q3UXZ9	Lysine-specific demethylase 5A OS=Mus musculus OX=10090 GN=Kdm5a PE=1 SV=2
Q5XUN4	Lysine-specific demethylase 5D OS=Pan troglodytes OX=9598 GN=KDM5D PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004250 (this species only)
Ubiquitin family	E3\|E3 activity RING\|PHD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08429 all species →	PLU-1	PLU-1-like protein	Family	Interproscan
PF00628 all species →	PHD	PHD-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013637 all species →	Domain	Lysine-specific demethylase-like domain	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan
IPR047970 all species →	Domain	Lysine-specific demethylase 5A, second PHD finger	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR019786 all species →	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR037869 all species →	Family	Spp1/CFP1	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46174 all species →	CXXC-TYPE ZINC FINGER PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0048188 all species →	Cellular Component	Set1C/COMPASS complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTIFP00000048153.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.