Gene detail

Detailed information of ENSVBPP00000000462.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020613897.1, rho-related protein racA-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVBPT00000000521

CAATGCATCTCCTGACAGTGCCACTGTGTCAAAAAGAGAAGGAAAGGCTCTTGCCAGATCTCTTGGTGCGTCATATGCAGAATGTAGTTTGCTGACTAATGACGGAGTGCAGGCAGCCCTTGAGAAAGCTGCTAAATTGGCTGTTGAAAAAAATGTGACATCAAAAGTAAAGGGGTTCTTCAGAAGAAGGAACAACAATTCTACTTCAGTTGATCAAGAATTACCACTACCTCCCGATCTCCCACCTGCAGGTTTTGCACCTCAGATAGAAGTTCTCAGTTCAACATTTGCAACTGACTTGCATTCTATGATGTCAGACACAAAAAGTGCAGATGTCAGACTTCTGTTTTCTGATGGTCAGTCTGTGGAAGCGCATAAAACTGTCCTTTCTGCTTCATCATCCATTTTCCTCAGTACCATGTGCACCTTTGAAGATATCTCCTGGGTGCATGATGAAAGTAATCACCCAAATCCTGTTGACATCGAAGGCCATCATCAGTGCCAAAACGAAGGCAAAACAGTAATAAGGTTGCATGAAAGCATTTCCAAAGCTGTTTTTTTGAAGGTTTTGGCTTTTCTCTACACTGGGTCGCCAGACATTTCAGAGGATGAAGACAAGAACTTTGTTAAAGAAATTCAAGTTGTTGCTGAGAAATTTCAGTTGGCCATGTTGTCCGACATTTGCACAAATTTACTCGAGGGGGATTCATTTCTGAATCTGAACAGTGGCAGCTGGCTAAACGACAACCTGGGGCAGGCTGTGAAGCATTTGTTTCTAAATAAGCCATTCCTAGCTGATGTCAAGTTCCGTGTGGAAGGCAGCATTGTGTATGGGCACAGGACAATATTGAACGCAAGGTCTGAGGTCATGGCAGCAATGTTGGGTGGGGCTTTCAGAGAGAGTGACTTGGATACAGAGATTGAAATCAAGGATGCTTCCCTCCAAAGTTTCTTGGCCTTACTGGAGTACCTCTACACTGACCACGCCCCAATAGAGGAGGGTGACTCGGTAGAAATAATGATTTTAGCTGACAGATTCTGCCTGCCAAGGCTTGTGACTCTGTGTGAGCTGTACATCGCTAAAAAAGTGTATTTGTCATTTTGCGAGAGAGTAGCAGATGGTACAAGTGATGTGATAAATCTCCTTCTCATATCACAGGCTCACAATGCCAAGCAGTTATCTGGCTGGTGTCTTCATTTCATTTCCACACGCTTCTCTGTGTTTGAGTCAACTAGAGAATTTGATCTTGTTCAAGGAGAAAACAGGAAACATATCAATGAACATCGCTGGCCACCTCTGTCTTATCTAGAAGCACAAAAGGAATATGAACGGAAATTCAGGAAACTTAATTCCAAGTGCAAAGTGATGTGACGTGTGCATGACAATGCTGCCTGACAAAGTAGAGGAATATGCTAGAACGTTGTTATGTCGAGGAGGAGCGAAGTGTATAAAGAAAAAGTGCAGAGGGATGCAAATCCCTATTTTGCTATTTTCCCCTTAGCTAGGCAGATTCTCAGACAGCCTAAGGGCACTGGCTCTCACTCCCTCCAGTGCAAGTAAGCAAGAATCAGATTagcgaaccccccccccccccccccaattttttttagcaTGTTTGTGAACTATTTGACATTTAGCTAGCTAGTCAAACAGTTATACTTGGTAATTAATTCAGACTTACAAATGAGGGGCAATTTAGTTTTTTATTACAAAAGTGAtctaaaaaacttttttttatagCCATGCTAGTTCTGCATTTTGTACATTGTCAATTGAGTAATTTTGTAATCTAATTCAGCTGGACAGCAATCAATAGAACACAAAATATTTGTGTGAAAGAGCATCAAAAAGTACTATGTAATAATAGTTATTTTGATATAATAAAATGcagtattttaaaaattaaaatgatataGCTATGTTAGAAAGTCAAATATGTACCAAGTCATAAGAAAATAATGTGCGTACATGAATCTTGCAAGTAAAGAGTAGTTATTTCAAGTTTGT

Protein

Uniprot

Gene family

Uniprot term	Description
P34147	Rho-related protein racA OS=Dictyostelium discoideum OX=44689 GN=racA PE=1 SV=2
O94844	Rho-related BTB domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RHOBTB1 PE=1 SV=2
Q9DAK3	Rho-related BTB domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rhobtb1 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR000210	Domain	BTB/POZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24413	SPECKLE-TYPE POZ PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0030162	Biological Process	regulation of proteolysis	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10523	SPOP; speckle-type POZ protein	-	Ubiquitin system	ko04121	deepkoala