Detailed information of ENSVBPP00000001591.1 in Meandrina meandrites

Genomic Location: not available for this species
NR annotation: XP_020601702.1, PHD finger protein 12-like isoform X2 [Orbicella faveolata]
Species Meandrina meandrites · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SPL2PHD finger protein 12 OS=Mus musculus OX=10090 GN=Phf12 PE=1 SV=1
Q96QT6PHD finger protein 12 OS=Homo sapiens OX=9606 GN=PHF12 PE=1 SV=2
Q96BD5PHD finger protein 21A OS=Homo sapiens OX=9606 GN=PHF21A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005166 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF00498
all species →		FHAFHA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR000253
all species →		DomainForkhead-associated (FHA) domainInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR008984
all species →		Homologous_superfamilySMAD/FHA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46309
all species →		PHD FINGER PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714
all species →		Molecular Functiontranscription corepressor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0070822
all species →		Cellular ComponentSin3-type complexInterproscan
GO:0140110
all species →		Molecular Functiontranscription regulator activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSVBPP00000001591.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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