Gene detail

Detailed information of ENSVBPP00000001897.1 in Meandrina meandrites

Genomic Location: chr9:14103392...14164584
NR annotation: XP_027058843.1, run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1 [Pocillopora damicornis]
Species Meandrina meandrites · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSVBPT00000002083

ATGTTTCATTTTCCTATGGCGGACGAGGAGGCGGTGTCATTACGGCATGCAAAAGAAAGGTGGTCACTGTTATTTGCACTCAAATATACGGTAGAGTGCATTCTGATGTCAGACTCACAAAACAACGTGGATACTTATGATAGCTTGAAACGTGTTAAAATCGATTTGGAGCGAATTATCAATCACGGACAGCAAGTaaGAGATGTTTTTGAGAGTATTGCAGTTTTCAGTGGAGATAAAGGAAGCTTTTATCAAGCTTTGCTAGATTATTGCTTGTCTGCTTCAAATCTGTTAGAGCTGGTAAATAAAAGAGAACAATTACAGTACTTCTATCAAGAATATGCATTTCTAAGAAGTGCTCCTCACATTGAAGCAATGTACATTTGTATGCAAGCCTTTGAGAAAGGTGACTCTCAACTGCTTGGTAAAATTGATAATGTGCTGTTGaacaagaaaaaatacattgaGCTGTGGTTGCACGAAAGTGCATATTTTAATGCTGGCATGCTGCAGTCCTCTGTTGTACTTGATGACATCCAAGGAAAAGCTGTTGATGAGTTGTCCTCTTCAAACAGCACTTACAGCAGTAGTGAAAATGATGACTTTCAGATGCTTTCACTGTATGGTTCACCAGATGACAGTCAGATCGAAATGGCTGACTATTCAGTTTACCAGCCTGCTGTTCTTTTAGAGGAAAATGTTCAACTGTATTCCTCAAAGTCTGGTCAGAACTTTTGTTATTTACCAAGAAATATGATTGATCTTAATCCTAGCActgaaagcaaaagaaaaagtacTACTCAGGTAGAAAATGCAGTTGGAGAAAGAAACGAATTGACTTTGCCTGTACAAGGATTATCGGCTTTAGGACCATCAAAAATGGGACAGAATGTAAGATCGACATTGGCACATGCAGCCTTGTCTGCTGTAACAGAAGGCGAAGAGACTTCTACTTCTTCAGCTGAATGGTTTGATAGTCATAATGACCAATTTATTTACAAACCTAGAAGAGCTAGCACTGGTAGTCTCAGTGAAAATTTGCTCTGCTCTAAAAGTACAATAAATGGGATGTTGGAAACATCCCCTCTTCCAATTAATCAAACAGGATCTTGTGACAAAAACAATAGCTGCACTAGTGAGTCTATTACAGACCATCAATTTACGAGGAAAGCTTTTGGACATAGCAGGTCAAAATCAGATCAAATAGGTCTACCAAAATTAAAGAAGAATGAGATTCTCATTGAAGGCCCAAGGTGCAGTGAAAGTAAGAAGGAGGATTCTTACAGTGGCATTAGCAGATTGTCATCTTCACTACCAACTACCTCAGAATCTCTGTACTGCAATGATCCATACTTGGAGGATCCCTATCAAGAACAATCCCTGGCATCAATTTTAGCATCACAGGACTTCAGCTCATGCGAATTAGATAAGaaccgcgctcggcccatggccgcgcgttTAATTATGAACACTtctgaagaggaagaagatgAAGAGATCCTTCATTTGAAAGAAGAACTTGAAAGAAAGAGATGGGagaaaaaacaaggaaaacaattGCTGGAGCAGGCTGCCTTTAGTGATGAAACCACACAATCAACAACTTCAGAACCGAGCACATGGACAAACTCATCAAGATCTGCATGTGAGAGTGACAATGAACTTAGTCCTGATTGGGAAGAGATTGCTCCATCTGGTAAACAACTCCAGGAATACAACACTGACATCCGTGTGCCCACTGCTACACTCGCGTCAATCACAGACTTTGATCCTTTGTCAGAAGCAGGAGATAATGCAGATATCAAGCAATCCTCTCAGCTCTCAGCTGAGACTGTAGCAAAAAGTCTACTGCAGAAGTTTGCCAACAGGAAGCACCCAGCTGCGTCTGAACTGCAATGGTTAGTTTCATTTCAAGATGCTCCTCAGTGCTTGCTTCCCCTACCGCACGCTGTTGCAGTAGCACCAGATGATATTCATGAAGTTGAAGCCTTCACACAGAAGTCTGTATCCAAGCAAGACTTGTTACCATGTCGCATAAGAGGAAACTCAGAGTGGGCTCCTCCCAGAGCACAGATTATTTTCCATGCTCACAAACCTCCCAGGAGGAAAGCCCTAATGAGCCAGCAAAACTTTAggtgtgctggttgtggtatgGCGGTAGCTGCAGACTACATAAAGCGATTTCGGTATTGTCACTATCTGGGGAAATATTTCTGCAGTACGTGTCACAGCAATGTTTTGGAAGTTATTCCAGCTAGAGTGATAAGGAAATGGGACTTTACCAAATATGAGGTTTCGAACTTTGCAAGAGATTTATTACATAGAATACACTTTGACGCTTTGTTCAACCTCATGGATCTTAATCCATCATTATATAAACGCTTCCGCGTTTTGGACGGATTGAAGGATATCCGAAGACGACTTCATTTCTTTAAGACCTTCATTCAGACATGTCGAAAAGCAAACaaATTAGCAGAAGAGTTCAGTAAATTGCCAGATCATATCTGCAGAGAACCACATCTTTATTCCATTCACGACCTTTTACAGGCTCATCATGGAGATCTACTTGTCTTTCTACGGAATTTAGCAATAGAATCCCTGACTCATATCAACCACTGtcagCTGTGTCTTGCCAAAGGATTTATTTGTGAATATTGCAAGAATGGAGACGATGTCATATTTCCTTTTCAACTTAACAGAGTTGTACAGTGTTCAGGCTGCCACGCATCATTTCACAAGGACTGTTTTGTTGAAGGGAAATGTCCAAAGTGTGAGAGAATACGTTTAAGGTAA

Transcript

ENSVBPT00000002083

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80U62	Run domain Beclin-1-interacting and cysteine-rich domain-containing protein OS=Mus musculus OX=10090 GN=Rubcn PE=1 SV=2
Q92622	Run domain Beclin-1-interacting and cysteine-rich domain-containing protein OS=Homo sapiens OX=9606 GN=RUBCN PE=1 SV=4
Q9H714	Protein associated with UVRAG as autophagy enhancer OS=Homo sapiens OX=9606 GN=RUBCNL PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004217 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21054 all species →	RUBC_PIKBD	Rubicon, PI3K-binding domain	Domain	Interproscan
PF13901 all species →	RH_dom	Rubicon Homology Domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048569 all species →	Domain	Rubicon, PI3K-binding domain	Interproscan
IPR025258 all species →	Domain	Rubicon Homology Domain	Interproscan
IPR052428 all species →	Family	Autophagy and Host Defense Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45971 all species →	PHOX (PX) DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:1901981 all species →	Molecular Function	phosphatidylinositol phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSVBPP00000001897.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.