Gene detail

Detailed information of ENSVBPP00000007069.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_022809868.1, serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVBPT00000007422

GATGGAGGCCGTAAACTATCTTTTAGACAAGGGAGCAGATCCGTCATTGAAGGGCCAGTATGGAAGGAATTTACTACACAACGCTTCACACGGTGGTAATGTCGCTATCATCGAGACAATGCTGTCACGTGgtcttgatatcaattcaaaagATAGTGATGGTGACACTCCATTACTGATTGCTGCTGCTTTGAATGGCAGGGTGGAGGCAGTAAACTATCTTTTAGACAAGGGAGCAGATCCGTCATTGAAAGGCAAGTGTGGAAGGAATTTACTACACAGCGCTTCAGAGGGTGGTAATGTGGCCATCATCGAGACAATGCTGTCACGTGgtcttgatatcaattcaaaagATAGTAATGGTAACACTCCATTAATGATTGCTGCTTTCACTGGCAAGATGGAGGCCGTAAACTATCTTTTAGACAACAGAGCAGATCCGTCTTTGACAGGCAACTTTGGAAGGAATTTACTACACAGCGCTTCAGAGGGCGGTAATGTCGCCATCATCGAGACAATGCTGTCACGTGgtcttgatatcaattcaaaagATAGTAATGGTAACACTCCATTAATGATTGCTGCTTTCACTGGCAAGATGGAGGCCGTAAACTATCTTTTAGACAACAGAGCAGATCCGTCTTTGACAGGCAACTTTGGAAGGAATTTACTACACAGCGCTTCAGAGGGTGGTAATGTGGCCATCATCGAGACAATGCTGTCACGTGgtcttgatatcaattcaaaagATAGAAATGGTAACACTCCATTAATGATTGCTGCTTGGAATGGCAATATGGAGGCAGTAAACTATCTTTTAGACAACGGAGCAGATCCGTCTTTGAAAGGCAAGTATGGAAGGAATTCACTACACAACGCTTCACAGGGTGGTAATGTCGCCATCATTGAGACAATGCTGTCACATGGTCTTGAGATCAATTCAAAAGATAGTAATGGTGACAATCCATTAATGATTGCTGCTTGGAATGGCAATATGGAGGCAGTAAACTATCTTTTAGACAACGGAGCAGATCCGTCTTTGAAAGGCAAGTATGGAAGGAATTCACTACACAACGCTTCACAGGGTGGTAATGTCGCTATCATCGAGACAATGCTGTCACGTGgtcttgatatcaattcaaaagACAGTAATGGTAACACTCCATTAATGATTGCTGCTGCTTTGAGTGGCAATATGGAGGCTGTAAACTATCTTTTAGACAAGGGAGCAGAACCGTCTTTGAAAGGCCGGTATGGAAGGAATTTACTACACAAAGCTTCATATGGTGGTAATGTCGCCATCAACAAGACGATGCTGTCACGTGGTCTTGATATAAATTCAAAAATAGATCAATTCAAAAGACTGCCACTGAATGAAGAACCGTAGTCCAGCCTTGTAACAGTTAGCTTTTACACAAAAGTAGTAAAACCGTACTTAGATTGTATTTGGCCAACTTGAACAGTAAATTTTTTCGTTTACTTTTTCACAAGTTGCAAGTGAGCGAAGATCATATTGCGTAATATTGCTCACGGCGaaaatataagagtttgtatgagTGGAAATATTTCTTATATATTGTAGGAAACAggaatacagtagaaccccggtaactcgaacctcTATAACTCGaacaaccccgctaactcgaactaaaTTTCGTTTcacttgatcaaaatttgggtcaaatttaccccgataactcgaattccGGTTCTTGCAACTCGCCGCGGTTGCCCATTGATTAGAGCAACGAACAGATCACGTATGTGACAGCCATTTTCCACTCTTATCACAAGAATGTATGGTCGTGATAGAGTTTCTGACGAGATAAGTTCAATTTGCACTGTACTGGAGACTGCACTGctgaaaaatcagtaaattatcaattattaacttggcaaattaaatattcaatcgaccccgataactcgaaacctcgctaactcgaactgtttttcgtttcccttcagagttcgagttaccggggTTCTACTGTACTTAGACCTCGTCCAGACGTATCCATTTTTCATTTTGCCTGTTTTTAAAAATTGCGCATCCACACGTATCGTCCGTCCAGACATGTGCGTTTCTGCTTGAAAACGGATATTTTGGCCTTGAATCATTCCAAATTGTCCTTGTCTTTCTCTGAAATCAAtgttttgttgacaaaattGTATCAGCAAGCACCTTTACATGCTGGTCTAACTTAGAACCTCAGAGGATCTCTGTTGACTCGTTTAGCGCTTTGATTTTCAAGACCGGTGGTAAAAGAAGCCCTGCTGATTAAGTCGTATTTTTAAATAACAAGCTTGAACGTTTTacctgaaaaaaatatttaaaataagatATGCTGTATTAAGTCTTAAAAATAGGCAACGTAGCAGT

Protein

Uniprot

Uniprot term	Description
Q8BLA8	Transient receptor potential cation channel subfamily A member 1 OS=Mus musculus OX=10090 GN=Trpa1 PE=1 SV=1
Q6RI86	Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Trpa1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06867	K06867; uncharacterized protein	-	Function unknown	-	deepkoala