Gene detail

Detailed information of ENSVBPP00000009889.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: PFX30602.1, Lactase-phlorizin hydrolase [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVBPT00000010312

ATGGCGGAAGGGCAAGATGAGTTTTACTATGGCGAATTTCCCAAAGATTTCATGTGGGGAACATCAACTTCAGCGTATCAAGTCGAAGGCGGCTGGGATGCGGACGGTAAGGGACCAAGCATCTGGGATAAATTCACTCAGGCAGGCGGTAATTCTTACATGAATCAAACAGGCGACATAACCTGCGATTCTTACCACAAAATCGACGAAGACGTCAAGCTATTGAAAAACCTCGGGGTAGGCTATTACAGGTTTTCAATCTCCTGGTCGAGAGTTTTGCCGAAGGGTACACTTGAGGAGGTGAATCAGGCTGGAGTGAACTATTACAACGATTTGATCAACTCGCTGCTAGAAAACGAAATCACTCCGATGGTCGCTCTGTACCATTTCGATCTACCCCAGGCGCTGCAAGACAAGTACGACGGCTGGTTGAATCCTGAAATGGCTGACATTTTCAACGACTACGCCAGGTTTTGTTTTGAATCGTTCGGTGATCGAGTCAAGTGGTGGATAACAATAAACGAGCCTTGGGAGGCAGCTCTCTTAGGTCACGGATTCGGTTTAACACCGCCAGGCAAGAAAGATCTTAGCACAGCCACATACAAAGTTGCCTATATAATGCTACTTGCCCACGCCAAGGCATGGCACACCTACGATCAAGTCTTCCGCGCCACACAGCAAGGCAAAGTGTCCATAATCCTCAATGTGCACTGGGGGGAACCCAAGTCTGACAAACAAGCTGACAAAGACGCCGCTGACCGCAGCATAGAATGGTGGCTCGGGTGGTTTGCTCATCCAGTATTCGTCAATGGAGATTGGCCTGACGTCATGAAGAAAGGCGTGAAGGAGAAAAGTGAAGCTAAAGGAATTCCAAATAGACTTCCGGAAATAACTGAGGCAGAGAAGCAACTGATCCAAGGTACAGCGGATTACTTCGCTCTGAACATGTACAGCGCCTTCCTCATTGAACATCAAGAATTCCCAGCCGAGGTGGAGTGGAACTATATGACCGATCAACAAATGAAAACCTCTGCTCACCCATCCTGGCAGCGAGGTGCCAATGTATGGCTTTTCAATACTCCCTGGGCCTTGCGAAAGCTTCTCAATTGGGTGAAAGAGCACTATGGAGACCCTGACATCATCATTACGGAGAATGGTTTTGCTATTGAAGGTGAAGACGATCTTACTGGCGAAGCCGCTTTGAACGACACGCAGCGAGTGGAATACCTGACCTCATATGTGAACGAAGCATTGAAAGCGATCCACTTAGATGGCGTTCGAGTTAAAGGCTACTTTCTTTGGTCTTTTCTGGATAATTTTGAGTGGATGGAAGGATATCGCGTCAGATTTGGGATTCACCGATTTGTTGCAGAAGCTGTTTCTAAGCATATTTATGGAAGGGACGGAACTGATGCAGTTGAAGAAATTGACTTAAGGGGGAGGAACCCTGGACCTGATGGTACCACTGCACTCTGCAAGGCTCTCATTgcagtaaacaaacaaaaacacttGACCGCTATTTCAAGTGGAACCTCTCCAAAGTGTCTCATCGTCCATACGGATGTCTGTGTGGACCATAGCAACCCAGATACCGTGTTTAAAGCACTGGAATCAAATAACGGTCTCGTGCAGCTTTCTATTTCGGTTTTTAGCGCTCTTCAGCTTGGAGATGATAGGCTATGTGGGTTCTTGAAACTTCTTAACCCAGATCATTTAACAAGCTTGGATTTTTCGTACAATGGATTAGCTTACTACGACAACGTCAACGTTGAACTCTCAACGATTTTTCGTGAGATGaaaaagttcacaaagttacgCGCTTTATGCCTGGCTCACAGCGACTTTGGTGAAAGCCATTTGAGGAATCTTTGTGAGATTATAGAGGGCCTTCCCTGTCTTGTATCGCTGGATCTTAGCGGGAATTGTATAGGCAGTAGCATTGGGCCTCTTTTAAATAGCATTACACAGCCACTCAACTGCTTAAAATTAGCGAAATGCAGAATCGGCAATGCTGGAATTGAGACCATCGCCCGTTCAAAACATTCATCCCAGCTCAGAGAGTTTGATGTTCAGTGTAATTCTCTTTCTTCAGAATGCACCGAGAATCTACTCTACATATTTGAGTCCTCGAAAAATACCCTACGAGAATTTTACGTGGGGGGAAACCCAGTTTACCCCTTGTTAAGGGTAAACAGACGATTTCTCGACCTTCGAATTGGAGTTAACACTGTATGCCCCGCCCCATCATGCTGA

Transcript

ENSVBPT00000010312

Protein

Uniprot

Uniprot term	Description
P09848	Lactase/phlorizin hydrolase OS=Homo sapiens OX=9606 GN=LCT PE=1 SV=3
W5PLZ6	Lactase/phlorizin hydrolase OS=Ovis aries OX=9940 GN=LCT PE=1 SV=1
Q02401	Lactase/phlorizin hydrolase OS=Rattus norvegicus OX=10116 GN=Lct PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00232	Glyco_hydro_1	Glycosyl hydrolase family 1	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001360	Family	Glycoside hydrolase family 1	Interproscan
IPR018120	Active_site	Glycoside hydrolase family 1, active site	Interproscan
IPR033132	Conserved_site	Glycosyl hydrolases family 1, N-terminal conserved site	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10353	GLYCOSYL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008422	Molecular Function	beta-glucosidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan