Gene detail

Detailed information of ENSVBPP00000011652.1 in Meandrina meandrites

Genomic Location: not available for this species
NR annotation: KAJ7385794.1, Cartilage matrix protein [Desmophyllum pertusum]
Species Meandrina meandrites · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5N9X2	Laccase-4 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC4 PE=2 SV=1
Q10ND7	Laccase-10 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC10 PE=2 SV=1
O80434	Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000566 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059 all species →	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF07731 all species →	Cu-oxidase_2	Multicopper oxidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008972 all species →	Homologous_superfamily	Cupredoxin	Interproscan
IPR001304 all species →	Domain	C-type lectin-like	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan
IPR016186 all species →	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR051004 all species →	Family	Dendritic cell-specific ICAM-grabbing non-integrin domain-containing protein	Interproscan
IPR033138 all species →	Conserved_site	Multicopper oxidases, conserved site	Interproscan
IPR011706 all species →	Domain	Multicopper oxidase, C-terminal	Interproscan
IPR002355 all species →	Binding_site	Multicopper oxidase, copper-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22802 all species →	C-TYPE LECTIN SUPERFAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0044419 all species →	Biological Process	biological process involved in interspecies interaction between organisms	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSVBPP00000011652.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.