Gene detail

Detailed information of ENSVBPP00000012136.1 in Meandrina meandrites

Genomic Location: chr1:2984252...2991672
NR annotation: XP_020616870.1, uncharacterized protein LOC110054851 [Orbicella faveolata]
Species Meandrina meandrites · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSVBPT00000012660

ATGCATTTCTTCAGTTCGTTTCTACATCATGTTGCAGATGAAGAATGCGCCGAAGAGAACATAGAAGGCCAAGCTGTAGTCCACTTGGATGCAAACATTCTGCAAAGGATCAAGCAAGAGCCAGTAGATTGCGACGAAGAGCCGGAGCTCACGTGCGTCACATTTCAACAGGATTTCAGTGACAATTCGTTTGAGGAAATAGTGCCGAAATATGCTGCCCCGGACGAGAGAAACTTACTAGAAGAAACAGTAAATGGTAACCAAGGCAACGGGAGCCATTCCATCCCACCGGTGGACCAGGAAATAGTTGCAGGTGACCAAAGTCACGTAAGTGAAGCGCTAGCCGCTCGCGAAACGGCTTCCTCTGACACGGACTCTTCAGGACTTCGTAGGAGTTTGCGCCAGCGCTTTTTGTTACAGCGGCTATCAAGTCAGCCGAAAGAGAAAGCATCAACCAACTTCCAAAAACAAAGTCCAAGATCACAGTCGGTTAGCAATTCAAGGAATCCATTAATCAGCAGTATTCGCAGACGAGACACGAGTAGTACCAGTCAGCGCGTCTTTCCAAACGAGTTGTCTGGTGCAGGGCGCACAGGCGAGATACAATCAAATAATATAATAAACGATGAAAGTGACTTGTTCAAACGACGATTTCGTAAGATGCTGAAAGACTTGGTGGCAAAGCGAATGTTAAAGTTACAGCATTCAGCAGTGTACAGTGGAACCGTGTCAGCCTTACGTCGTAAAGTAGCGATTCTAGAACGAAGAAATATGCAGTTAGAAGATAAAGCCGACAGGCTACAGACGTCCATTATGAATCTTTACAACGAGAGGGAGAATACGATGGCTAAGACTGTATCACGTGGCACGCAAGTCTCCATGGGAATGATCCTGAGTCGGGCTTGGTCTGCTCGTAACGGCGCAGAGAAACCTGCGGCAATCGCTGCGGAAGAACCGGGGCCATCGTGGGGCTCCGAGGATGGGCCAGTCATAGTTAAAGTTTGCGGACAACCAATGAATGGTGCAACTGCTCACGTTCCGTCTCCTCAAAACCCTCAAACAGTATTTAACAACACACCACAGCCACCGATAATATCACCGCAATCTACCCAAAGTACCCAGGCTAGCGGCTCGCTCCCCAAAATACAGCATGTTTCTTCTGGTAATAGCTTCGTGGCGAGAGCGCCCTATCAGCATCCACGTGTGCCTTATCGTGGGACTTTTATACTACCAGAACATCGGTTTCTGGGTCATAGGTCAAACGAAATGCCCATTTCTCCTGAAAACGTGTCAAGGCGTCTGCCAACTACAAACAGACCCATGCAAAATTCGGGAACGAGTAACTTGTCAATGAATTGCGGAGTTGCTAACAAGGTACGAATGCAAGGACAACAGACTGGTGTGGCAGTTCCCTGTTCAGGTAATGTATCTGCGTATCTACAACAAAATGGAAATGGACCAGTACATCGCATCGCCACCGTCCGACCTCAGCAGGCAATTATTTCCACGGCGATCATTCCTGCAAACCAAAATGCTGTGCAGCAAACGGCTCAAGTACAACACCTTTCTCATATTCAACCAGTGCCTACTAATAACCCACCCGATATAGGCAGAGAGGCTGATCATGCCACTTCATTAGTCCATCACACATCGCGCAACATTTCACTGAACAATGCAAATGACCCGCCAACATTACAGACGGCCTCTGTACAGACTCAGGTTCAGAATACTCTCGCTTCTTCGACGCAAAGTCATATAGGAGGTAATCGAGAAGTAGCCTCACAAGATCAAATTCCTGTGACTGGTGTACAGACGTCTCAAGAAGACCAGGCTCAGACCAAAGAAGGTGATACCACGCCTGAAAATACCTTATCACCAAACATTCCATCCTCGAGCTCCCAGTATCGCATTCGAGGTTTTCACGAACTGCTACCCGATTCGTACCCTATTGTGAAACATAATTACAGAGCCAAGGCAGTTTCGGTTGCCTCCTGGGGAGAAGCTTCAACTGCAAGACAGAAACAACGTTCGCGAGCGGGAGGTGAGACTGCTTCTCAGTCAAGTGAACATCAGTCTAACCAGGAGGCTCTAGAAATTAGACGTCGAAGACCGCCAGTGGGTTGCCTTTGTTGTCCCCCAGATTCCAATCAAGCAACCGCGtctggaaataaaatttcagagaaAGGGCAGACATGTCAGCAGCAACGGAATGATAGTCAACCAGTACACAGCAACGATCAGACGATCGTTTCTGCTGGTATATCACGAGCTAGCGCTCAGGGGGGTGCACCACAGATAAAGTCAGCGCCTTCCTTACCTTTTTCACAGCAGCAAGGCCTTCCAGTAACACAACCATTGATTAATTCAGAGTGTTCTATTTCAACAGCAGCATCAGTCAGTCAAATATCTTCATCTGGTCCAAATTATCAGTACCACCAGAATGCCTCCGGAGCTAATATGAACTATCCTAGACTTATCCAGCCTTCTCAACAAACTGGAAACACAGTTCCAGCAGTTCCTGATCAACCAGGTTTCCAGCAAGAATCTAGGTTCTTTGACCAAATGGCCCACGCTAGGTTTCGTCAGCAATCAGGTGGTCATCCAATCCCCAGGCAATTGCATTACACCCCCAATGAGCTGATAGTTTCTCATCAAAGTGGCAATAGTTCCGTAGGTATTCAAAGACACTTTTCTAAACAGCAGCAACCGCAACCACAACAGCAACTTttacagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacaacaacaacaagcgcAACAGCAACATCATCAACAACAGCAactgcagcagcagcagcaacaaccaCTAGCACAGCAATACCAACAACAACCGTACCAACAACAACTataccaacaacaacaataccAACAACAACTataccaacaacaacaataccagcaacaacaacaaccatcaCCGTCTCAACCTTCCTGGTTAACATGCTATCAGCAAAGAGCAGGTTACTTACAGCCCCCAGCAGCGCCTAATCAGGGCCATCCAACCAGGATATACCCCAAACCACATCCAGGTGCACAACCATACTGGCAACATAACCCTCAATATATGACGCCTGGTGGAACGTTTATTCCTGGACAATCAGTTCGTTTTAATAGTGTTACAAATACGAACGAGTACCGCTATGTGCAAGGTCCTCACGGTCAAACACAGTTCACTAAACCTCCTCAAAATGTAAGACATGGTGCCTATTTTCATCAGCAGGTCCAACCACAGGTTCATCAAAATCAACTCATCGTTCAAGCATCTTCAGCACAAGTAAGACAACTGCAGTTACGCCATAATCAGCTGGTAGATACTTCACCAAATGGGTCGCAATCCTTCCAAATGACTGCCCCACCAGGAGTGAGCGGTGGCGCTAGTGGTTTCCTTCCTAATCAGAGTCCAAACATTATACGGGAACTCTCGTCTTCTTTGTCTGCCAGAGAGAATGAGCAATCAGTTCTAAGTGCCTCGTTGTCAAATCATGCGCCGTCCACATCATCTAAAACACCGACAGATGTCCCTTGGTCAGAAAAACAATCATTATCACTCCCAGCCGGCCAAACCAAAAGgcttaatccaaatattgcagtAGCCAGTCCTGCGCAGTTAGGAAGCGGGCAAGATTCCATTTTCGTAAAAGGTGGCAAAGTCACACCTATAAAAGATACTTGCCTAGATTCAACCGTTTCCCAGGGGGAAAGTGATTATAGTCAATCGATGCCTGTTCAACCATTAGCAGGGATCAAGCTCTCTCATGATCCTGATAACACTGTCAATTTAACGACATGTACAGAAACAGAAACACCGGCCGGAACCATAGGTAGTTTAACAGACCGCGAGGACAAGGAAGGAAATAACTCTTTCTCGTTAAAACCTGTCCTTAGAGTAGAGCAAAGCGATAATGGAATTATTTTGTCATGGGATTTAACCAGCCGAGAAGGCGAATCAAAAGTAATTAAGTATGAACTGTATGTGATGTCGGTTCCTACCGAATCGGCACCTTTGAACGAGTGGGAAAGTTTGGGTGTTGTGGACGCCCTCGCTCTTCCCATGGCTTGTACGATGACTCAGTTTCTTTCGGGAGCTTCCTACTATTTTGCCGTGCGCGCTATCACAGCCAATGGAAATTGTGAGCTGTTTAGTGATCCTTGCTCAATCAACAATCAATCTTCCTAA

Transcript

ENSVBPT00000012660

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZIE8	Activating transcription factor 7-interacting protein 1 OS=Gallus gallus OX=9031 GN=ATF7IP PE=2 SV=1
Q6VMQ6	Activating transcription factor 7-interacting protein 1 OS=Homo sapiens OX=9606 GN=ATF7IP PE=1 SV=3
Q7TT18	Activating transcription factor 7-interacting protein 1 OS=Mus musculus OX=10090 GN=Atf7ip PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010509 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16794 all species →	fn3_4	Fibronectin-III type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR026085 all species →	Family	Activating transcription factor 7-interacting protein	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23210 all species →	ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0090309 all species →	Biological Process	obsolete positive regulation of DNA methylation-dependent heterochromatin formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14972	PAXIP1, PTIP; PAX-interacting protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.